Archive for mesopelagic

Hydrostatic pressure substantially reduces deep-sea microbial activity

Posted by mmaheigan 
· Thursday, May 11th, 2023 

Deep sea microbial communities are experiencing increasing hydrostatic pressure with depth. It is known that some deep sea microbes require high hydrostatic pressure for growth, but most measurements of deep-sea microbial activity have been performed under atmospheric pressure conditions.

In a recent paper published in Nature Geoscience, the authors used a new device coined ‘In Situ Microbial Incubator’ (ISMI) to determine prokaryotic heterotrophic activity under in situ conditions. They compared microbial activity in situ with activity under atmospheric pressure at 27 stations from 175 to 4000 m depths in the Atlantic, Pacific, and the Southern Ocean. The bulk of heterotrophic activity under in situ pressure is always lower than under atmospheric pressure conditions and is increasingly inhibited with increasing hydrostatic pressure. Single-cell analysis revealed that deep sea prokaryotic communities consist of a small fraction of pressure-loving (piezophilic) microbes while the vast majority is pressure-insensitive (piezotolerant). Surprisingly, the piezosensitive fraction (~10% of the total community) responds with a more than 100-fold increase of activity upon depressurization. In the microbe proteomes, the authors uncovered taxonomically characteristic survival strategies in meso- and bathypelagic waters. These findings indicate that the overall heterotrophic microbial activity in the deep sea is substantially lower than previously assumed, which implies major impacts on the carbon budget of the ocean’s interior.

Figure caption: Deep sea microbial activity under varying pressure. (a) In situ bulk leucine incorporation rates normalized to rates obtained at atmospheric pressure conditions. (b) A microscopic view of a 2000 m sample collected in the Atlantic and incubated under atmospheric pressure conditions. The black halos around the cells are silver grains corresponding to their activities. The highly active cells (indicated by arrows) were rarely found in in situ pressure incubations. (c) Depth-related changes in the metaproteome of three abundant deep sea bacterial taxa (Alteromonas, Bacteroidetes, and SAR202). The number indicates shared and unique up- and down-regulated proteins in different depth zones.

Authors
Chie Amano (University of Vienna, Austria)
Zihao Zhao (University of Vienna, Austria)
Eva Sintes (University of Vienna, IEO-CSIC, Spain)
Thomas Reinthaler (University of Vienna, Austria)
Julia Stefanschitz (University of Vienna, Austria)
Murat Kisadur (University of Vienna, Austria)
Motoo Utsumi (University of Tsukuba, Japan)
Gerhard J. Herndl (University of Vienna, Netherlands Institute for Sea Research)

Twitter @microbialoceanW

How zooplankton control carbon export in the Southern Ocean

Posted by mmaheigan 
· Thursday, December 3rd, 2020 

The Southern Ocean exhibits an inverse relationship between surface primary production and export flux out of the euphotic zone. The causes of this production-export decoupling are still under debate. A recently published mini review in Frontiers in Marine Science focused on zooplankton, an important component of Southern Ocean food webs and the biological pump. The authors compared carbon export regimes from the naturally iron-fertilised Kerguelen Plateau (high surface production, but generally low export) with the iron-limited and less productive high nutrient, low chlorophyll (HNLC) waters south of Australia, where carbon export is relatively high.

Figure 1: The role of zooplankton in establishing the characteristic export regimes at two sites in the Southern Ocean, (a) the highly productive northern Kerguelen Plateau, which exhibits low export, and (b) the iron-limited waters south of Australia with low production, but relatively high carbon export.

Size structure and zooplankton grazing pressure are found to shape carbon export at both sites. On the Kerguelen Plateau, a large size spectrum of zooplankton acts as “gate-keeper” to the mesopelagic by significantly reducing the sinking flux of phytoaggregates, which establishes the characteristic low export regime. In the HNLC waters, however, the zooplankton community is low in biomass and grazes predominantly on smaller particles, which leaves the larger particles for export and leads to relatively high export flux.

Gaps in knowledge related to insufficient seasonal data coverage, understudied carbon flux pathways, and associated mesopelagic processes limit our current understanding of carbon transfer through the water column and export. More integrated data collection efforts, including the use of autonomous profiling floats (e.g., BGC-Argo), stationary moorings, etc., will improve seasonal carbon flux data coverage, thus enabling more reliable estimation of carbon export and storage in the Southern Ocean and improved projection of future changes in carbon uptake and atmospheric carbon dioxide levels.

 

Authors:
Svenja Halfter (University of Tasmania)
Emma Cavan (Imperial College London)
Ruth Eriksen (CSIRO)
Kerrie Swadling (University of Tasmania)
Philip Boyd (University of Tasmania)

Elusive protists transport large quantities of silica into the ocean interior

Posted by hbenway 
· Friday, September 7th, 2018 

Phaeodaria are single-celled eukaryotes (a.k.a. protists) belonging to the supergroup Rhizaria. Like diatoms, phaeodarians build up skeletons made of opaline silica, but unlike their emblematic relatives, phaeodarians have been largely ignored in the marine silica cycle.

The contribution of phaeodarians to total biogenic silica (bSiO2) export is markedly enhanced at low total bSiO2 export (analysis did not include data from 2014 due to abnormally depleted phaeodarian population).

In a recent study published in Global Biogeochemical Cycles (also see related Research Spotlight in AGU Eos), authors used a combination of extensive sediment trap deployments and in situ imagery during four cruises of the California Current Ecosystem Long-Term Ecological Research (CCE-LTER) Program off the coast of California to quantify biogenic silica export mediated by giant phaeodarians (>600 µm). These data revealed that giant phaeodarians possess among the highest recorded cellular silica content (up to 43 µg Si cell-1). In addition, measurements of vertical fluxes suggest that these organisms can play a surprisingly large role in silica export (ranging from 10-80% of total silica export) in more oligotrophic waters. Also, because they are most abundant in waters below the euphotic zone, phaeodarians contribute to increased biogenic silica flux in the mesopelagic, in contrast with typically observed decreases in carbon flux with depth. Given their significant contribution to silica export, phaeodarians should be considered in global budgets and models of ocean silica cycles, especially in oligotrophic waters.

Authors
Tristan Biard (Scripps Institution of Oceanography)
Jeffrey W. Krause (University of Southern Alabama)
Michael R. Stukel (Florida State University)
Mark D. Ohman (Scripps Institution of Oceanography)

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