Ocean Carbon & Biogeochemistry
Studying marine ecosystems and biogeochemical cycles in the face of environmental change
  • Home
  • About OCB
    • About Us
    • Get Involved
    • Project Office
    • Code of Conduct
    • Scientific Steering Committee
    • OCB committees
      • Ocean Time-series
      • US Biogeochemical-Argo
      • Ocean-Atmosphere Interaction
    • Scientific Breadth
      • Biological Pump
      • Changing Marine Ecosystems
      • Changing Ocean Chemistry
      • Estuarine and Coastal Carbon Fluxes
      • Ocean Carbon Uptake and Storage
      • Ocean Observatories
  • Activities
    • OCB Webinar Series
    • Summer Workshops
    • Scoping Workshops
      • Ecological Forecasting – North American Coastlines
      • Expansion of BGC-Argo and Profiling Floats
      • Future BioGeoSCAPES program
      • Ocean-Atmosphere Interactions
      • Oceanic Methane & Nitrous Oxide
    • Other Workshops
      • GO-BCG Scoping Workshop
    • Science Planning
      • Coastal CARbon Synthesis (CCARS)
      • North Atlantic-Arctic
    • Ocean Acidification PI Meetings
    • Training Activities
      • PACE Training Activity
  • Small Group Activities
    • Aquatic Continuum OCB-NACP Focus Group
    • Arctic-COLORS Data Synthesis
    • Carbon Isotopes in the Ocean Workshop
    • CMIP6 WG
      • CMIP6 Models Workshop
    • Coastal BGS Obs with Fisheries
    • C-saw extreme events workshop
    • Filling the gaps air–sea carbon fluxes WG
    • Fish, fisheries and carbon
    • Fish Carbon WG
      • Fish Carbon WG Workshop
      • Fish carbon workshop summary
    • Lateral Carbon Flux in Tidal Wetlands
    • Marine carbon dioxide removal
      • Marine CDR Workshop
    • Metaproteomic Intercomparison
    • Mixotrophs & Mixotrophy WG
    • N-Fixation WG
    • Ocean Carbonate System Intercomparison Forum
    • Ocean Carbon Uptake WG
    • Ocean Nucleic Acids ‘Omics
    • OOI BGC sensor WG
    • Phytoplankton Taxonomy WG
  • Science Support
    • Data management and archival
    • Early Career
    • Funding Sources
    • Jobs & Postdocs
    • Meeting List
    • OCB topical websites
      • Ocean Fertilization
      • Trace gases
      • US IIOE-2
    • Outreach & Education
    • Promoting your science
    • Student Opportunities
    • OCB Activity Proposal Solicitations
    • Travel Support
  • Publications
    • Ocean Carbon Exchange
    • Newsletter Archive
    • Science Planning and Policy
    • OCB Workshop Reports
  • OCB Science Highlights
  • News

Archive for vertical flux

Blue hole in the South China Sea reveals ancient carbon

Posted by mmaheigan 
· Wednesday, July 8th, 2020 

Blue holes are unique depositional environments that are formed within carbonate platforms. Due to an enclosed geomorphology that restricts water exchange, blue hole ecosystems are typically characterized by steep biogeochemical gradients and distinctive microbial communities. For the past three decades, studies have described vertical gradients in physical, chemical, and biological parameters that typify blue hole water columns, but their elemental cycles, particularly carbon, remain poorly understood.

Figure 1. Aerial photo of the Yongle Blue Hole in the South China Sea (Credit: P. Yao et al./JGR Biogeosciences)

In July 2016, the Yongle Blue Hole (YBH) was discovered to be the deepest known blue hole on Earth (~300 m). YBH is located in the Xisha Islands of the South China Sea. The unique features and ease of accessibility make YBH an ideal natural laboratory for studying carbon cycling in marine anoxic systems. In a recent study published in JGR Biogeosciences, the authors reported extremely low concentrations of dissolved organic carbon (DOC) (e.g., 22 µM) and very high concentrations of dissolved inorganic carbon (DIC) (e.g., 3,090 µM) in YBH deep waters. Radiocarbon dating revealed that the YBH DOC and DIC were unusually old, yielding ages (6,810 and 8270 years BP, respectively) that are much more typical of open ocean deep water. Based on H2S and microbial community composition profiles, the authors concluded that sharp redox gradients and a high abundance of sulfur cycling bacteria were likely responsible for much of the DOC consumption in YBH. The unusually low concentrations and old DOC ages in the relatively shallow YBH suggest short-term cycling of recalcitrant DOC in oceanic waters, which has been recognized as a long-term microbial carbon sink in the global ocean. The stoichiometry of DIC and total alkalinity changes suggested that the accumulation of DIC in the deep layer of the YBH was largely derived from both the dissolution of carbonate and OC decomposition through sulfate reduction. However, the role of carbonate dissolution from the walls of the blue hole in affecting the old ages of carbon in this system remain uncertain, yet there appears to no evidence of subterranean freshwater into the bottom waters of the blue hole. In the face of expanding oxygen minimum zones and anthropogenically-induced coastal hypoxia, blue holes such as YBH can provide an accessible natural laboratory in which to study the microbial and biogeochemical features that typify these low-oxygen systems.

 

Authors:
Peng Yao (Ocean University of China)
Thomas S. Bianchi (University of Florida)
Xuchen Wang (Ocean University of China)
Zuosheng Yang (Ocean University of China)
Zhigang Yu (Ocean University of China)

Hurricane-driven surge of labile carbon into the deep North Atlantic Ocean

Posted by mmaheigan 
· Thursday, February 27th, 2020 

Tropical cyclones (hurricanes and typhoons) are the most extreme episodic weather event affecting subtropical and temperate oceans. Hurricanes generate intense surface cooling and vertical mixing in the upper ocean, resulting in nutrient upwelling into the photic zone and episodic phytoplankton blooms. However, their influence on the deep ocean is unknown.

Figure 1. (a) Particulate organic carbon (POC) flux and percentage of the total mass flux (yellow) (top panel); fluxes (middle panel) and POC-normalized concentrations (bottom panel) of diagnostic lipid biomarkers for phytoplankton-derived and labile material, zooplankton, bacteria, and other (see legend); (b) Lipid concentrations (left panel) and POC-normalized concentrations (right panel) of diagnostic lipid biomarkers for the same sources as in (a) (see legend) measured two weeks after Nicole’s passage (25-29 Oct. 2016). Shown for reference are total lipid concentration profiles in April 2015 (dark gray, typical post spring bloom conditions) and Nov 2015 (light gray, typical minimum production period).

In October 2016, Category 3 Hurricane Nicole passed over the Bermuda time-series site (Oceanic Flux Program (OFP) and Bermuda Atlantic Time-Series site (BATS)) in the oligotrophic NW Atlantic Ocean. In a recent study published in Geophysical Research Letters, authors synthesized multidisciplinary data from hydrographic and phytoplankton measurements and lipid composition of sinking and suspended particles collected from OFP and BATS, respectively, after Hurricane Nicole in 2016. After the hurricane passed, particulate fluxes of lipids diagnostic of fresh phytodetritus, zooplankton, and microbial biomass increased by 30-300% at 1500 m depth and 30-800% at 3200 m depth (Figure 1a). In addition, mesopelagic suspended particles were enriched in phytodetrital material, as well as zooplankton- and bacteria-sourced lipids (Figure 1b), indicating particle disaggregation and a deep-water ecosystem response.

These results suggest that carbon export and biogeochemical cycles may be impacted by climate-induced changes in hurricane frequency, intensity, and tracks, and, underscore the sensitivity of deep ocean ecosystems to climate perturbations.

Authors:
Rut Pedrosa-Pamies (Marine Biological Laboratory)
Maureen H. Conte (Bermuda Institute of Ocean Science and Marine Biological Laboratory)
JC Weber (Marine Biological Laboratory)
Rodney Johnson (Bermuda Institute of Ocean Science)

Estimating the large-scale biological pump: Do eddies matter?

Posted by mmaheigan 
· Wednesday, December 4th, 2019 

One factor that limits our capacity to quantify the ocean biological carbon pump is uncertainty associated with the physical injection of particulate (POC) and dissolved (DOC) organic carbon to the ocean interior. It is challenging to integrate the effects of these pumps, which operate at small spatial (<100 km) and temporal (<1 month) scales. Previous observational and fine-scale modeling studies have thus far been unable to quantify these small-scale effects. In a recent study published in Global Biogeochemical Cycles, authors explored the influence of these physical carbon pumps relative to sinking (gravity-driven) particles on annual and regional scales using a high-resolution (2 km) biophysical model of the North Atlantic that simulates intense eddy-driven subduction hotspots that are consistent with observations.

Figure 1: North Atlantic idealized double gyre ocean biophysical model. Top: Sea surface temperature, surface chlorophyll and mixed-layer depth during the spring bloom (March 21). Bottom: total export of organic carbon (POC+DOC) at 100 and individual contributions from the gravitational (particle sinking) and subduction (mixing, eddy advection and Ekman pumping) pumps for one day during the spring bloom (March 21) and averaged annually. Physical subduction hotspots visible on the daily export contribute little to the annual export due to strong compensation of upward and downward motions.

The authors showed that eddy dynamics can transport carbon below the mixed-layer (500-1000 m depth), but this mechanism contributes little (<5%) to annual export at the basin scale due to strong compensation between upward and downward fluxes (Figure 1). Additionally, the authors evidenced that small-scale mixing events intermittently export large amounts of suspended DOC and POC.

These results underscore the need to expand the traditional view of the mixed-layer carbon pump (wintertime export of DOC) to include downward mixing of POC associated with short-lived springtime mixing events, as well as eddy-driven subduction, which can contribute to longer-term ocean carbon storage. High-resolution measurements are needed to validate these model results and constrain the magnitude of the compensation between upward and downward carbon transport by small-scale physical processes.

 

Authors:
Laure Resplandy (Princeton University)
Marina Lévy (Sorbonne Université)
Dennis J. McGillicuddy Jr. (WHOI)

South Pacific particulate organic carbon fate challenges Martin’s Law

Posted by mmaheigan 
· Tuesday, May 14th, 2019 

Joint science highlight with GEOTRACES

Carbon storage in the ocean is sensitive to the depths at which particulate organic carbon (POC) is respired back to CO2 within the twilight zone (100-1000m). For decades, it has been an oceanographic priority to determine the depth scale of this regeneration process. To investigate this, GEOTRACES scientists are deploying new isotopic tools that provide a high-resolution snapshot of POC flux and regeneration across steep biogeochemical gradients in the South Pacific Ocean.

A recent paper in PNAS reported on particulate organic carbon (POC) fluxes throughout the water column (focusing on the upper 1000 m) along the GP16 GEOTRACES section between Peru and Tahiti (Figure 1A).  POC fluxes (Figure 1B) were derived by normalizing concentrations of POC to 230Th following analysis of samples collected by in situ filtration. This work builds on a research theme initiated at the GEOTRACES-OCB synthesis workshop held at Lamont-Doherty Earth Observatory in 2016.

Figure caption: Site map and POC flux characteristics from GEOTRACES GP16 section. Plot A) shows the GP16 station locations as white circles, with nearby sediment trap deployments as black stars, with 2013 MODIS satellite-derived net primary productivity in the background. Plot B) shows POC fluxes from particulate 230Th-normalization from selected stations spanning the zonal extent of the GP16 section. Plot C) shows power law exponent b values for each GP16 station (blue), compared to estimates from bottom-moored sediment traps in the South Pacific (black and red dashed lines), a compilation of sediment traps in the North Pacific (green dashed line), and neutrally buoyant sediment traps in the subtropical North Pacific (yellow shaded band). GP16 regeneration length scales from 230Th-normalization agree most closely with the estimates from neutrally buoyant sediment traps.

The study results show that POC regeneration depth is shallower than anticipated, especially in warm stratified waters of the subtropical gyre. Regeneration depth—expressed in terms of the Martin-curve power-law exponent “b” (Figure 1C)—is shown to be greater than previous estimates (horizontal dashed lines), but similar to values obtained using neutrally buoyant sediment traps at the Hawaii Ocean Time-series Station Aloha. In contrast to the rapid regeneration of POC in warm stratified waters, POC regeneration within the ODZ is below our detection limits. Models have shown that shallower regeneration of POC leads to less efficient carbon storage in the ocean, making the authors speculate that global warming, yielding expanded and more stratified gyres, may induce a reduction of the ocean’s efficacy for carbon storage via the biological pump.

 

Authors:
Frank J. Pavia, Robert F. Anderson, Sebastian M. Vivancos, Martin Q. Fleisher (Columbia University)
Phoebe J. Lam (University of California Santa Cruz)
B.B. Cael (now at University of Hawai’i Manoa, formerly at MIT)
Yanbin Lu, Pu Zhang, R. Lawrence Edwards (University of Minnesota)
Hai Cheng (University of Minnesota and Xi’an Jiaotong University)

How fast are elements sinking in the ocean?

Posted by mmaheigan 
· Tuesday, March 5th, 2019 

The sinking of elements in the ocean influences many important processes such as deep ocean carbon storage and the availability of trace metals for phytoplankton. Previously, quantification of this sinking flux has been done using sediment trap deployments or tracer measurements of a particle-reactive radioisotope. Since sediment traps and each particular radioisotope each have caveats in how they quantify sinking flux, sinking particulate flux measurements, especially trace metal fluxes, are especially sparse, with relatively large uncertainties. For the first time ever, in the U.S. GEOTRACES North Atlantic campaign (GA03), four types of radioisotope data (thorium-234, polonium-210, thorium-228 and thorium-230) were measured, along with a periodic table’s worth of particulate elements that can be used to quantify sinking fluxes at locations with prior sediment trap studies, including the Ocean Flux Program (OFP), for comparison.

Sinking flux estimates of particulate organic carbon (POC) and particulate iron (pFe) derived using different methods, including the different radionuclides labelled and sediment traps from oceanic sites near Bermuda. These include the Bermuda-Atlantic Time-series site (BATS), the Ocean Flux Program site (OFP), and the Bermuda Rise (BaRFlux site). The GA03 and BaRFlux data represent observations from 2012 and 2013. The triangles and stars represent data from throughout the time-series observations of those sites.

In a new study published in Global Biogeochemical Cycles, a team of collaborators synthesized all of the radioisotope and particle composition measurements from the GA03 cruise, as well as results from a nearby study called BaRFlux, to constrain sinking fluxes of carbon and eight trace elements (P, Cd, Co, Cu, Mn, Al, Fe and thorium-232) throughout the North Atlantic Ocean. The five different methods for constraining flux (sediment traps plus the four radioisotope methods) agree encouragingly well given the independent uncertainties associated with each method. Additionally, since the four radioisotopes have a range in half-lives from days to thousands of years, the different methods can reconstruct particle fluxes throughout the water column, from the dynamic bloom-and-bust-like changes near the surface to the relatively slow, long-term sinking into the abyssal ocean. These fluxes will improve the understanding of the global budgets of carbon and trace elements. This study would not have been possible without the support of OCB and GEOTRACES who co-funded a synthesis workshop on biogeochemical cycling of trace elements at the Lamont-Doherty Earth Observatory in summer 2016.

Also see Eos highlight on this article

Authors:
Christopher T. Hayes (University of Southern Mississippi)
Erin E. Black (Woods Hole Oceanographic Institution, now at Dalhousie University)
Robert F. Anderson (Lamont-Doherty Earth Observatory of Columbia University)
Mark Baskaran (Wayne State University)
Ken O. Buesseler (Woods Hole Oceanographic Institution)
Matthew A. Charette (Woods Hole Oceanographic Institution)
Hai Cheng (Xi’an Jiaotong University and University of Minnesota)
Kirk Cochran (Stony Brook University)
Lawrence Edwards (University of Minnesota)
Patrick Fitzgerald (Stony Brook University)
Phoebe J. Lam (University of California Santa Cruz
Yanbin Lu (Earth Observatory of Singapore)
Stephanie O. Morris (Woods Hole Oceanographic institution)
Daniel C. Ohnemus (Bigelow Laboratory for Ocean Sciences, now at Skidaway Institute of Oceanography)
Frank J. Pavia (Lamont-Doherty Earth Observatory of Columbia University)
Gillian Stewart (Queens College, City University of New York)
Yi Tang (Queens College, City University of New York)

Shipboard LiDAR: A powerful tool for measuring the distribution and composition of particles in the ocean

Posted by mmaheigan 
· Tuesday, October 23rd, 2018 

Despite major advances in ocean observing capabilities, characterizing the vertical distribution of materials in the ocean with high spatial resolution remains challenging. Light Detection and Ranging (LiDAR), a technique that relies on measurement of the “time-of-flight” of a backscattered laser pulse to determine the range to a scattering object, could potentially fill this critical gap in our sampling capabilities by providing remote estimates of the vertical distribution of optical properties and suspended particles in the ocean.

A recent article in Remote Sensing of Environment details the development of a portable shipboard LiDAR and its capabilities for extending high-frequency measurements of scattering particles into the vertical dimension. The authors deployed the experimental system (shown in Figure 1a) during research cruises off the coast of Virginia and during a passenger ferry crossing of the Gulf of Maine (associated with the Gulf of Maine North Atlantic Time Series program-GNATS). Remote measurements of LiDAR signal attenuation corresponded well with simultaneous in situ measurements of water column optical properties and proxies for the concentration of suspended particles. Interestingly, the researchers also observed that the extent to which the return signal was depolarized (also known as the LiDAR depolarization ratio) may provide information regarding the composition of particles within the scattering volume. This is evidenced by the strong relationship between the depolarization ratio and the backscattering ratio, an indicator of the bulk composition (mineral vs. organic) of the particles within a scattering medium (Figure 1b).

Figure 1. a) LiDAR system deployed to look through a chock at the bow of the M/V Nova Star. b) Relationship between the LiDAR linear depolarization ratio (ρ) and coincident measurements of the particulate backscattering ratio (bbp/bp). The black line represents a least-squares exponential fit to the data.

As LiDAR technology becomes increasingly rugged, compact, and inexpensive, the regular deployment of oceanographic LiDAR on a variety of sampling platforms will become an increasingly practical method for characterizing the vertical and horizontal distribution of particles in the ocean. This has the potential to greatly improve our ability to investigate the role of particles in physical and biogeochemical oceanographic processes, especially when sampling constraints limit observations to the surface ocean.

 

Authors:
Brian L. Collister (Old Dominion University)
Richard C. Zimmerman (Old Dominion University)
Charles I. Sukenik (Old Dominion University
Victoria J. Hill (Old Dominion University)
William M. Balch (Bigelow Laboratory for Ocean Sciences)

Elusive protists transport large quantities of silica into the ocean interior

Posted by hbenway 
· Friday, September 7th, 2018 

Phaeodaria are single-celled eukaryotes (a.k.a. protists) belonging to the supergroup Rhizaria. Like diatoms, phaeodarians build up skeletons made of opaline silica, but unlike their emblematic relatives, phaeodarians have been largely ignored in the marine silica cycle.

The contribution of phaeodarians to total biogenic silica (bSiO2) export is markedly enhanced at low total bSiO2 export (analysis did not include data from 2014 due to abnormally depleted phaeodarian population).

In a recent study published in Global Biogeochemical Cycles (also see related Research Spotlight in AGU Eos), authors used a combination of extensive sediment trap deployments and in situ imagery during four cruises of the California Current Ecosystem Long-Term Ecological Research (CCE-LTER) Program off the coast of California to quantify biogenic silica export mediated by giant phaeodarians (>600 µm). These data revealed that giant phaeodarians possess among the highest recorded cellular silica content (up to 43 µg Si cell-1). In addition, measurements of vertical fluxes suggest that these organisms can play a surprisingly large role in silica export (ranging from 10-80% of total silica export) in more oligotrophic waters. Also, because they are most abundant in waters below the euphotic zone, phaeodarians contribute to increased biogenic silica flux in the mesopelagic, in contrast with typically observed decreases in carbon flux with depth. Given their significant contribution to silica export, phaeodarians should be considered in global budgets and models of ocean silica cycles, especially in oligotrophic waters.

Authors
Tristan Biard (Scripps Institution of Oceanography)
Jeffrey W. Krause (University of Southern Alabama)
Michael R. Stukel (Florida State University)
Mark D. Ohman (Scripps Institution of Oceanography)

Updates and Plans for the First EXPORTS Field Campaign

Posted by mmaheigan 
· Thursday, February 1st, 2018 

Contacts: David Siegel (UCSB; EXPORTS Science Lead) & Ivona Cetinić (NASA GSFC/USRA; EXPORTS Project Scientist)

 

EXPORTS in a Nutshell

Ocean ecosystems constitute a significant fraction of the world’s primary production, fixing CO2 and creating oxygen while playing critical roles in sequestering CO2 from the atmosphere. An improved understanding of the cycling and fate of oceanic organic carbon will not only allow for better prediction of how these processes may change in the future, but it will help underpin the societal value of these ocean ecosystem services. The EXport Processes in the Ocean from RemoTe Sensing (EXPORTS) field campaign aims to provide answers to these questions.

The goal of EXPORTS is to develop a predictive understanding of the export and fate of global ocean net primary production (NPP) and its implications for the Earth’s carbon cycle in present and future climates (oceanexports.org). To develop this quantitative understanding, EXPORTS will measure and model the export pathways that remove fixed organic carbon from the upper ocean and drive the attenuation of these vertical fluxes within the ocean interior. EXPORTS datasets will be used to develop and test numerical predictive and satellite-data diagnostic models of NPP fates and their carbon cycle impacts. EXPORTS builds on decades of NASA-funded research on developing and validating satellite data-driven models of regional to global NPP and hence, EXPORTS will contribute to NASA’s upcoming Plankton, Aerosol, Cloud and ocean Ecosystem (PACE) mission.

 

A Brief History of EXPORTS

The NASA EXPORTS field campaign is the result of an initial open competition in 2012 by the NASA Ocean Biology and Biogeochemistry (OBB) Program to identify scoping workshops for future field campaigns. This was followed by many years of committee-based planning, community vetting of science and implementation plans, and final peer review.  The NASA EXPORTS Science and Implementation Plans were made publicly available by the NASA OBB program. In February 2016, the National Science Foundation held the Biology of the Biological Pump (BoBP) workshop aimed in part to leverage NASA’s planned investment in the EXPORTS field program. In August 2016, NASA announced it would support data mining and observational system simulation experiment (OSSE) projects to help with planning the NASA EXPORTS field campaign and five projects were funded under this pre-EXPORTS call.

In early 2017, NASA released a call for proposals for the EXPORTS field program and the competition for inclusion on the NASA EXPORTS Science Team and its leadership. The call also included the implementation approach for the EXPORTS field program, with two major cruises to collect in situ data, followed by a synthesis and analysis phase to be competed in the future. At the same time, NSF released a Dear Colleague Letter (DCL) stating they would consider proposals that leveraged the NASA investment with objectives that supported the BoBP plan. From the NASA competition, 11 projects were selected for support (Table 1). Three NSF proposals have been recommended for support (at the time of this writing, the awarding of these grants is not yet official), bringing the count to a total of 41 PIs and co-PIs that are supported by NASA and NSF on EXPORTS/BoBP. This level of investment likely makes EXPORTS the largest coordinated U.S.-funded biogeochemical field program since the Joint Global Ocean Flux Study (JGOFS) nearly 2 decades ago. Table 1 lists the funded projects, PI, and co-PIs, project titles, and links to two page descriptions for each project.

Any implementation of the EXPORTS field program must result in the quantification of the major export pathways that remove fixed organic carbon from the upper ocean and sequester it at depth. NASA is uniquely poised, given the global vantage point of space-based observations, to use Earth observing satellite data to meet this objective, while also understanding observational requirements for future advanced Earth Observing missions.  Quantification of major carbon export pathways requires the simultaneous measurement of 1) sinking particle fluxes (and their composition), 2) the export of organic carbon to depth via vertically migrating zooplankton, and 3) the vertical transport of dissolved and suspended particulate organic carbon to depth, where it is remineralized by different microbial communities. To develop predictive links to satellite ocean color-retrievable parameters, the quantification of export pathways must be augmented by research programs focused on, but not limited to, the elucidation of plankton community structure, rates of NPP and grazing, and optical oceanography. Complicating this further is the stochastic nature of export flux determinations that necessitates a fully four-dimensional sampling design while maintaining a long-term perspective. This reasoning led to the Agency selection of projects listed in Table 1.

The planning of the EXPORTS field campaign is well underway. The first field deployment is planned to take place in the summer of 2018 in the Northeast Pacific, while the tentative second cruise will be in the North Atlantic Ocean in the spring of 2020. NASA has formed a project office staffed of Agency and EXPORTS PIs to direct EXPORTS’ progress. The EXPORTS Science Team, which comprises the funded PIs, is participating on near-weekly teleconferences, and co-chief scientists have been selected. An initial EXPORTS kickoff meeting was held in September 2017 in the Washington, DC area. There, the PIs organized themselves into working groups focused on creating short methodological descriptions for each measurement to be made. This documentation will be critical for the metadata, the project data management, and for ensuring legacy of the program through a set of NASA Technical Memoranda. This has also proven to be an excellent way to foster cross-project collaborations. A second PI meeting is scheduled for mid-February 2018, leveraging the upcoming Ocean Sciences Meeting.

 

EXPORTS First Field Deployment

The first EXPORTS field deployment will be to the Northeast Pacific Ocean in late summer 2018. Two ships, the R/V Roger Revelle and the R/V Sally Ride, will be deployed for 27 days of coordinated sampling around Station P (50°N 145°W), while EXPORTS’ autonomous component will ensure a longer-term presence. The choice of Station P as an anchor point for the field campaign was made based on results from the data mining and OSSE projects and the availability of a long-term data set for this site, as well as the many sampling partnerships afforded by ongoing programs. Canada’s Line P long-term hydrographic/biogeochemistry program has been running since 1949, and they currently conduct three annual transect cruises from British Columbia to Station P. Other useful partnerships include NOAA Pacific Marine Environmental Laboratory’s (PMEL) air-sea interaction buoy and the NSF’s Ocean Observatories Initiative’s (OOI) global node at Station P.

 

Figure 1: Cartoon depicting many of the individual elements to be deployed during the 2018 EXPORTS sampling program in the North Pacific.

The EXPORTS 2018 field deployment will comprise four basic components (depicted in Figure 1 above). First, several autonomous vehicles will be deployed before the ship observations. An instrumented Lagrangian float will be deployed at depth and used to set the spatial center of the sampling program, while an instrumented Seaglider will be used to provide vertical and some horizontal spatial information around the Lagrangian float’s drift. In addition, and if approved by the OOI Facility Board, instrumented gliders deployed at the Station P OOI global node will be used to supplement the autonomous vehicle data streams.

Second, the R/V Roger Revelle will be the Process Ship, and will follow the Lagrangian float. The Process Ship will focus on rates (NPP, sinking particle fluxes, grazing, net community production, zooplankton respiration and fecal particle production, aggregate formation, etc.) and vertical information (microbial community structure and particle size spectra) in the water mass surrounding the float. Rate measurements will be made using water sampled with a trace metal-clean rosette system, and sinking particle fluxes from neutrally buoyant sediment traps (NBSTs) and sediment trap array. In particular, microbial community structure will be measured using a variety of techniques, including high-throughput microscopic imaging systems, meta-community genomic sequencing, isolation and experimentation on individual marine snow aggregates, and gel trap-collected sinking particles. The Process Ship will also conduct a complete optical oceanographic sampling program ensuring links to remotely sensed parameters. Drs. Deborah Steinberg (VIMS) and Jason Graff (OSU) have volunteered to be co-chief scientists for the R/V Revelle.

Third, the R/V Sally Ride will be the Survey Ship making spatial patterns about the Process Ship on scales from roughly 1 km to nearly 100 km. The focus of the Survey Ship will be collecting horizontal spatial information on particle export (234Th disequilibrium), net community production (O2/Ar), organic carbon stocks, phytoplankton composition, and inherent and apparent optical properties. The Survey Ship will also deploy a suite of instrumentation to characterize the particle size spectrum from 20 nm to nearly a cm. It will also be responsible for validating the calibration of the autonomous vehicles’ bio-optical instrumentation and the development of the biogeochemical proxies. Norm Nelson (UCSB) and Mary Jane Perry (self-affiliated) have agreed to be the co-chief scientists on the R/V Sally Ride.

Last, EXPORTS needs a long-term sampling presence to tie the ship-based observations to climatically relevant time and space scales. The Lagrangian float and Seaglider will sample for ~6 months, bracketing EXPORTS’ intensive ship observations, and thus providing some long-term perspectives to the ship sampling. Partnering programs like Line P and the OOI Global Node will allow for some additional in situ sampling opportunities and broader temporal context. Further, the PMEL mooring and a profiling float project recommended for funding by NSF will extend the long-term biogeochemical observations.

The integration of the observations will generate a data set that will not only be invaluable for building new algorithms for retrievals of new and refined data products from NASA’s current fleet of Earth Observing Satellites, but also will be critical in the development of new sets of requirements for future satellite observations of our Earth system. As described in the EXPORTS Implementation Plan, the likelihood of the EXPORTS achieving its predictive goals will increase as the number and variety of observations available to develop and test novel algorithms increases. Hence, the EXPORTS program is particularly motivated to collaborate with international partners who would be interested to share their data sets to address these important issues.

 

An Amazing Opportunity for Ocean Science

EXPORTS is the first large-scale, coordinated opportunity aimed at understanding the ocean’s biological pump since the JGOFS program. Hence, the EXPORTS team is planning to create a long-term legacy for these one-of-a-kind datasets. NASA is supporting a full-time data manager to make sure that all of the information collected is easily accessible to all; as per NASA policies, all data will be freely available. Efforts are being made to ensure the intercalibration and interoperability of measurements made across different platforms, thus ensuring continuity of the datasets. EXPORTS also plans to over-collect whole water, filtered particulate, and trap-collected samples that can be used for many purposes, both now by collaborators, and in the future as analytical methodologies become more powerful.

The timing for EXPORTS could not be better. Our understanding of the biological pump and in particular, the fate of ocean NPP has rapidly advanced over the past decade. We now know that the biological pump is four-dimensional, which complicates our observational approaches, and that food web and aggregate dynamics, microbial community composition and function, individual organism physiology and behavior, and submesoscale turbulent transport are all components that need to be quantified. Further, our observing tools and capabilities have witnessed giant leaps over just the past couple of years. Novel imaging instruments can now measure particle and aggregate size distributions and identify and quantify plankton abundances. Genomic approaches enable the characterization of plankton communities and their physiology. Novel hyperspectral optical measurements of ocean reflectance as well as component inherent optical properties provide strong links to present and future satellite ocean color missions. High-resolution numerical models now enable the elucidation of submesoscale (100s m to ~10 km) processes that include food webs and biogeochemistry, while autonomous vehicles provide persistent and spatially distributed observations that complement the shipboard sampling. It seems the time for EXPORTS is now.

Click for PDF of article and table

Table 1: EXPORTS Science Team

Lead PI Co-PIs Project Title
Michael Behrenfeld
(OSU) – NASA
Emmanuel Boss (UMaine), Jason Graff (OSU), Lionel Guidi (LOV), Kim Halsey (OSU), & Lee Karp-Boss (UMaine) First Step – Linking Remotely-Detectable Optical Signals, Photic Layer Plankton Properties, and Export Flux  
Ken Buesseler
(WHOI) – NASA
Claudia Benitez-Nelson (USC) & Laure Resplandy (Princeton) Elucidating Spatial and Temporal Variability in the Export and Attenuation of Ocean Primary Production using Thorium-234 
Craig Carlson
(UCSB) – NASA
Dennis Hansell (RSMAS) Evaluating the Controls of Dissolved Organic Matter Accumulation, its Availability to Bacterioplankton, its Subsequent Diagenetic Alteration and Contribution to Export Flux
Meg Estapa
(Skidmore) -NASA
Ken Buesseler
(WHOI), Colleen Durkin (MLML) & Melissa Omand (URI)
Linking Sinking Particle Chemistry and Biology with Changes in the Magnitude and Efficiency of Carbon Export into the Deep Ocean 
Craig Lee
(UW) – NASA
Eric D’Asaro (UW), David Nicholson (WHOI), Melissa Omand (URI), Mary Jane Perry (self-affiliated) & Andrew Thompson (CalTech) Autonomous Investigation of Export Pathways from Hours to Seasons
Adrian Marchetti (UNC) – NASA Nicolas Cassar (Duke) & Scott Gifford (UNC) Quantifying the Carbon Export Potential of the Marine Microbial Community: Coupling of Biogenic Rates and Fluxes with Genomics at the Ocean Surface
Susanne Menden-Deuer
(URI) – NASA
Tatiana Rynearson (URI) Quantifying Plankton Predation Rates, and Effects on Primary Production, Phytoplankton Community Composition, Size Spectra and Potential for Export 
Collin Roesler (Bowdoin) – NASA Heidi Sosik (WHOI) Phytoplankton community structure, carbon stock, carbon export and carbon flux: What role do diatoms play in the North Pacific and North Atlantic Oceans? 
David Siegel
(UCSB) – NASA
Adrian Burd (UGA), Andrew McDonnell (UAF), Norm Nelson (UCSB) & Uta Passow (UCSB) Synthesizing Optically and Carbon Export-Relevant Particle Size Distributions for the EXPORTS Field Campaign
Deborah Steinberg (VIMS) – NASA Amy Maas (BIOS) Zooplankton-Mediated Export Pathways: Quantifying Fecal Pellet Export and Active Transport by Diel and Ontogenetic Vertical Migration in the North Pacific and Atlantic Oceans 
Xiaodong Zhang (UND) – NASA Deric Gray (NRL), Lionel Guidi (LOV) & Yannick Huot (Sherbrooke) Optically Resolving Size and Composition Distributions of Particles in the Dissolved-Particulate Continuum from 20 nm to 20 mm to Improve the Estimate of Carbon Flux
Bethany Jenkins (URI) – NSF* Mark Brzezinski (UCSB) & Kristen Buck (USF) Collaborative Research: Diatoms, Food Webs and Carbon Export – Leveraging NASA EXPORTS to Test the Role of Diatom Physiology in the Biological Carbon Pump
Ben Van Mooy (WHOI) -NSF* Environmental Lipidomics of Suspended and Sinking Particles in the Upper Ocean
Andrea Fassbender (MBARI) – NSF* Constraining Upper-Ocean Carbon Export with Biogeochemical Profiling Floats

*Project recommended for funding by NSF, but not officially funded as of this publication.

Lasers shed light on giant larvacean filtration impact on the ocean’s biological pump

Posted by mmaheigan 
· Thursday, January 4th, 2018 

To accurately assess the impacts of climate change, we need to understand how atmospheric carbon is transported from surface waters to the deep sea. Grazers and filter feeders drive the ocean’s biological pump as they remove and sequester carbon at various rates. This pump extends down into the midwater realm, the largest habitat on earth. Giant larvaceans are fascinating and enigmatic occupants of the upper 400 m of the water column, where they build complex filtering structures out of mucus that can reach diameters greater than 1 m in longest dimension (Figure 1A). Because of the fragility of these structures, direct measurements of filtration rates require us to study them in situ. We developed DeepPIV, an ROV-deployable instrument (Figure 1B) to directly measure fluid motion and filtration rates in situ (Figure 1C).

Figure 1. (A) Traditional view of a giant larvacean illuminated by white ROV lights. (B) DeepPIV instrument is seen attached to Monterey Bay Aquarium Research Institute’s (MBARI) MiniROV. (C) DeepPIV-illuminated interior view of a giant larvacean house, where particle motion in ambient seawater serves as a proxy for fluid motion. White arrows in (A) and (C) indicate larvacean head/trunk; white arrow in (B) indicates DeepPIV.

The filtration rates we measured for giant larvaceans are far greater than for any other zooplankton filter feeder. When combined with abundance data from a 22-year time series, the grazing impact of giant larvaceans indicates that within 13 days, they can filter the total volume of water within their habitable depth range (~100-300 m; based on maximum abundance and measured filtration rates). Our results reveal that the contribution of giant larvaceans to vertical carbon flux is much greater than previously thought. Small larvaceans, which are present in the water column in even larger quantities than giant larvaceans, may also have a measurable impact on carbon fluxes. New technologies such as DeepPIV are yielding more quantitative observations of midwater filter feeders, which is improving our understanding of the roles that deep-water biota play in the long-term removal of carbon from the atmosphere.

Read the full journal article: http://advances.sciencemag.org/content/3/5/e1602374.full

Authors: (All at MBARI)
Kakani Katija
Rob E. Sherlock
Alana D. Sherman
Bruce H. Robison

Zooplankton play a key and diverse role in the ocean carbon cycle

Posted by mmaheigan 
· Thursday, December 7th, 2017 

How does the enormous diversity of zooplankton species, life cycles, size, feeding ecology, and physiology affect their role in ocean food webs and cycling of carbon?

In the 2017 issue of Annual Review of Marine Science, Steinberg and Landry review the fundamental and multifaceted roles that zooplankton play in the cycling and export of carbon in the ocean. Carbon flows through marine pelagic ecosystems are complex due to the diversity of zooplankton consumers and the many trophic levels they occupy in the food web–from single-celled herbivores to large carnivorous jellyfish. Zooplankton also contribute to carbon export processes through a variety of mechanisms (mucous feeding webs, fecal pellets, molts, carcasses, and vertical migrations).


Figure 1.  Pathways of cycling and export of carbon by zooplankton in the ocean.

Climate change and other stressors are already affecting zooplankton abundance, distribution, and life cycles, and are predicted to result in widespread changes in zooplankton carbon cycling in the future. These changes will affect both the larger marine food web that depends upon zooplankton for food (fish) or recycled products for growth (primary producers) and the amount of carbon exported into the deep sea–where far from contact with the atmosphere it no longer contributes to global warming.

 

Authors:

Deborah K. Steinberg, Virginia Institute of Marine Science, The College of William and Mary
Michael R. Landry, Scripps Institution of Oceanography

Next Page »

Filter by Keyword

234Th disequilibrium abundance acidification africa air-sea flux air-sea interactions air-sea interface algae alkalinity allometry ammonium AMOC anoxia anoxic Antarctic anthro impacts anthropogenic carbon aquaculture aragonite saturation arctic Argo argon arsenic artificial seawater Atlantic Atlantic modeling atmospheric carbon atmospheric CO2 atmospheric nitrogen deposition authigenic carbonates autonomous platforms bacteria BATS benthic bgc argo bio-go-ship bio-optical bioavailability biogeochemical cycles biogeochemical cycling biogeochemical models biogeochemistry Biological Essential Ocean Variables biological pump biological uptake biophysics bloom blooms blue carbon bottom water boundary layer buffer capacity C14 CaCO3 calcification calcite calcium carbonate carbon-climate feedback carbon-sulfur coupling carbon budget carbon cycle carbon dioxide carbon export carbon sequestration carbon storage Caribbean CCA CCS changi changing marine ecosystems changing marine environments changing ocean chemistry chemical oceanographic data chemical speciation chemoautotroph chesapeake bay chl a chlorophyll circulation climate change climate variability CO2 CO2YS coastal darkening coastal ocean cobalt Coccolithophores community composition conservation cooling effect copepod coral reefs CTD currents cyclone data data access data management data product Data standards DCM dead zone decadal trends decomposers decomposition deep convection deep ocean deep sea coral deoxygenation depth diagenesis diatoms DIC diel migration diffusion dimethylsulfide dinoflagellate discrete measurements dissolved inorganic carbon dissolved organic carbon DOC DOM domoic acid dust DVM earth system models ecology ecosystems ecosystem state eddy Education Ekman transport emissions ENSO enzyme equatorial regions error ESM estuarine and coastal carbon estuarine and coastal carbon fluxes estuary euphotic zone eutrophication evolution export export fluxes export production EXPORTS extreme events extreme weather events faecal pellets filter feeders filtration rates fire fish Fish carbon fisheries floats fluid dynamics fluorescence food webs forage fish forams freshening freshwater frontal zone fronts functional role future oceans geochemistry geoengineering geologic time GEOTRACES glaciers gliders global carbon budget global ocean global warming go-ship grazing greenhouse gas Greenland groundwater Gulf of Maine Gulf of Mexico Gulf Stream gyre harmful algal bloom high latitude human food human impact hurricane hydrogen hydrothermal hypoxia ice age ice cores ice cover industrial onset inverse circulation ions iron iron fertilization isotopes jellies katabatic winds kelvin waves krill kuroshio laboratory vs field land-ocean continuum larvaceans lateral transport LGM lidar ligands light light attenuation lipids mangroves marine carbon cycle marine heatwave marine particles marine snowfall marshes Mediterranean meltwater mesopelagic mesoscale metagenome metals methane methods microbes microlayer microorganisms microscale microzooplankton midwater mixed layer mixed layers mixing mixotrophy modeling models mode water molecular diffusion MPT multi-decade n2o NAAMES NASA NCP net community production net primary productivity new ocean state new technology Niskin bottle nitrate nitrogen nitrogen fixation nitrous oxide north atlantic north pacific nuclear war nutricline nutrient budget nutrient cycling nutrient limitation nutrients OA ocean-atmosphere ocean acidification ocean acidification data ocean carbon uptake and storage ocean color ocean observatories ocean warming ODZ oligotrophic omics OMZ open ocean optics organic particles oscillation overturning circulation oxygen pacific paleoceanography particle flux pCO2 PDO peat pelagic PETM pH phenology phosphorus photosynthesis physical processes physiology phytoplankton PIC plankton POC polar regions pollutants precipitation predation prediction primary production primary productivity Prochlorococcus proteins pteropods pycnocline radioisotopes remineralization remote sensing repeat hydrography residence time resource management respiration resuspension rivers rocky shore Rossby waves Ross Sea ROV salinity salt marsh satell satellite scale seafloor seagrass sea ice sea level rise seasonal patterns seasonal trends sea spray seaweed sediments sensors shelf system shells ship-based observations shorelines silicate silicon cycle sinking particles size SOCCOM soil carbon southern ocean south pacific spatial covariations speciation SST stoichiometry subduction submesoscale subpolar subtropical sulfate surf surface surface ocean Synechococcus teleconnections temperate temperature temporal covariations thermocline thermodynamics thermohaline thorium tidal time-series time of emergence top predators total alkalinity trace elements trace metals trait-based transfer efficiency transient features Tris trophic transfer tropical turbulence twilight zone upper ocean upper water column upwelling US CLIVAR validation velocity gradient ventilation vertical flux vertical migration vertical transport volcano warming water clarity water quality waves western boundary currents wetlands winter mixing world ocean compilation zooplankton

Copyright © 2023 - OCB Project Office, Woods Hole Oceanographic Institution, 266 Woods Hole Rd, MS #25, Woods Hole, MA 02543 USA Phone: 508-289-2838  •  Fax: 508-457-2193  •  Email: ocb_news@us-ocb.org

link to nsflink to noaalink to WHOI

Funding for the Ocean Carbon & Biogeochemistry Project Office is provided by the National Science Foundation (NSF) and the National Aeronautics and Space Administration (NASA). The OCB Project Office is housed at the Woods Hole Oceanographic Institution.