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Archive for changing ocean chemistry

What can algae tell us about translating laboratory science to nature?

Posted by mmaheigan 
· Thursday, June 9th, 2022 

Ocean acidification research has grown over the past few decades. Much of recent research documents negative impacts of changing carbonate chemistry on calcifying marine organisms in laboratory experiments. At the 2018 Ocean Acidification PI Meeting, a group of us asked “Can these laboratory responses to ocean acidification be scaled up to accurately predict the responses of marine ecosystems?” To answer this research question, we developed a semi-quantitative synthesis of benthic calcifying algae responses to ocean acidification, recently published in the ICES Journal of Marine Science.

Figure 1. Comparing directional responses of individuals and communities to acidification in laboratory and field settings highlights mismatches. Specifically, field studies document higher proportion of negative responses compared to laboratory experiments. We provide a series of recommendations for future research to better bridge this gap of understanding in responses to ocean acidification. Figure modified from Page et al. 2022.

We detail in the paper how the proportion of positive, neutral, and negative responses in laboratory experiments often didn’t match field observations. Additionally, laboratory experiments mainly report short-term responses (days to weeks) across tropical and temperate locations. In contrast, field studies emphasize long-term responses (months to years) from fewer global locations. Using our synthesis, we developed nine recommendations that will enhance our ability to translate laboratory experiment results into actual responses of marine taxa to ongoing and future acidification in the natural environment. These future research directions are applicable not only to ocean acidification studies but can be directly applied to the broader field of climate change. We hope these recommendations will lead to greater confidence in our projections of climate change impacts at different ecological scales, and better inform the conservation and management of our valuable marine ecosystems.

 

Backstory

Initially, we set out to answer this research question through a meta-analysis comparing the effect size of the impacts of ocean acidification on benthic calcifying macroalgae in laboratory and field settings. We quickly realized this approach was not going to work because of the much smaller number of responses recorded in field settings, the different methods used, and response parameters measured between the laboratory and field; these differences made calculating and comparing effect sizes impossible. Therefore, we landed on the approach of conducting a semi-quantitative synthesis to compare directional responses in laboratory and field settings. The results of this synthesis and the process of developing a robust research approach to answer our question inspired us to discuss and develop the recommendations for future research presented in the paper.

 

Authors (affils and Twitter handles)
Heather N. Page (Sea Education Association) @heathernicopage
Keisha D. Bahr (Texas A&M University – Corpus Christi) @thebahrlab
Tyler Cyronak (Nova Southeastern University) @tcyronak
Elizabeth B. Jewett (National Oceanic and Atmospheric Administration) @LibbyJewett
Maggie D. Johnson (King Abdullah University of Science and Technology) @MaggieDJohnson
Sophie J. McCoy (University of North Carolina at Chapel Hill) @MarEcology

Zooplankton evolutionary rescue is limited by warming and acidification interactions

Posted by mmaheigan 
· Friday, November 19th, 2021 

A key issue facing ocean global change scientists is predicting the fate of biota under the combined effects of ocean warming and acidification (OWA). In addition to the constraints of studying multifactor drivers, predictions are hampered by few evolutionary studies, especially for animal populations. Evolutionary studies are essential to assess the possibility of evolutionary rescue under OWA– the recovery of fitness that prevents population extirpation in the face of environmental change.

Figure 1. Population fitness of the copepod Acartia tonsa vs generation under ambient, AM (18oC, 400 µat pCO2), ocean warming, OW (22oC, 400 µat pCO2), ocean acidification, ocean acidification (18oC, 2000 µat pCO2), and ocean warming and acidification ( 22oC, 2000 µat pCO2). Shown are means and 95% confidence intervals around the mean. The purple line shows that while fitness decreased after the 12th generation, it was still considerably higher than at generation zero. Treatment lines are offset for clarity. No and Nτ (Y-axis legend) represent population size at the beginning and end of a generation (τ), and their ratio is the population fitness. Adapted from Dam et al. (2021).

A paper by Dam et al. published in Nature Climate Change examined the response of a ubiquitous copepod (zooplankter) to OWA for 25 generations to test for evolutionary rescue (Fig. 1). Using a suite of life-history traits, the researchers determined population fitness (the net reproductive rate per generation) under ambient, ocean warming, ocean acidification and OWA conditions. While population fitness decreased drastically under OWA conditions, it recovered in a few generations.  However, after 12 generations under OWA, in contrast to OW or OA, fitness started to decrease again, suggesting incomplete evolutionary rescue driven by antagonistic interactions between warming and acidification. Such interactions add complexity to predictions of the fate of the oceanic biota under climate change.

Limited copepod evolutionary rescue would mean lower fisheries yields under OWA conditions as copepods are a main food source for forage fish. Copepods are also important vectors of the sequestration of CO2 to deeper waters of the ocean. Limited copepod adaptation under OWA could weaken the efficiency of the biological carbon pump.

 

Authors:
Hans G. Dam (University of Connecticut)
James de Mayo (University of Connecticut)
Gihong Park (University of Connecticut)
Lydia Norton (University of Connecticut)
Xuejia He (Jinan University, China)
Michael B. Finiguerra (University of Connecticut)
Hannes Baumann (University of Connecticut)
Reid S. Brennn (University of Vermont)
Melissa H. Pespeni (University of Vermont)

Introducing the Coastal Ocean Data Analysis Product in North America (CODAP-NA)

Posted by mmaheigan 
· Friday, October 22nd, 2021 

Coastal ecosystems are hotspots for commercial and recreational fisheries, and aquaculture industries that are susceptible to change or economic loss due to ocean acidification. These coastal ecosystems support about 90% of the global fisheries yield and 80% of the known marine fish species, and sustain ecosystem services worth $27.7 Trillion globally (a number larger than the U.S. economy). Despite the importance of these areas and economies, internally-consistent data products for water column carbonate and nutrient chemistry data in the coastal ocean—vital to understand and predict changes in these systems—currently do not exist. A recent study published in Earth Syst. Sci. Data compiled and quality controlled discrete sampling-based data—inorganic carbon, oxygen, and nutrient chemistry, and hydrographic parameters collected from the entire North American ocean margins—to create a data product called the Coastal Ocean Data Analysis Product for North America (CODAP-NA) to fill the gap. This effort will promote future OA research, modeling, and data synthesis in critically important coastal regions to help advance the OA adaptation, mitigation, and planning efforts by North American coastal communities; and provides a foothold for future synthesis efforts in the coastal environment.

Figure caption. Sampling stations of the CODAP-NA data product.

 

Authors:
Li-Qing Jiang (University of Maryland; NOAA NCEI)
Richard A. Feely (NOAA PMEL)
Rik Wanninkhof (NOAA AOML)
Dana Greeley (NOAA PMEL)
Leticia Barbero (University of Miami; NOAA AOML)
Simone Alin (NOAA PMEL)
Brendan R. Carter (University of Washington; NOAA PMEL)
Denis Pierrot (NOAA AOML)
Charles Featherstone (NOAA AOML)
James Hooper (University of Miami; NOAA AOML)
Chris Melrose (NOAA NEFSC)
Natalie Monacci (University of Alaska Fairbanks)
Jonathan Sharp (University of Washington; NOAA PMEL)
Shawn Shellito (University of New Hampshire)
Yuan-Yuan Xu (University of Miami; NOAA AOML)
Alex Kozyr (University of Maryland; NOAA NCEI)
Robert H. Byrne (University of South Florida)
Wei-Jun Cai (University of Delaware)
Jessica Cross (NOAA PMEL)
Gregory C. Johnson (NOAA PMEL)
Burke Hales (Oregon State University)
Chris Langdon (University of Miami)
Jeremy Mathis (Georgetown University)
Joe Salisbury (University of New Hampshire)
David W. Townsend (University of Maine)

The ephemeral and elusive COVID blip in ocean carbon

Posted by mmaheigan 
· Monday, September 20th, 2021 

The global pandemic of the last nearly two years has affected all of us on a daily and long-term basis. Our planet is not exempt from these impacts. Can we see a signal of COVID-related CO2 emissions reductions in the ocean? In a recent study, Lovenduski et al. apply detection and attribution analysis to output from an ensemble of COVID-like simulations of an Earth system model to answer this question. While it is nearly impossible to detect a COVID-related change in ocean pH, the model produces a unique fingerprint in air-sea DpCO2 that is attributable to COVID. Challengingly, the large interannual variability in the climate system  makes this fingerprint  difficult to detect at open ocean buoy sites.

This study highlights the challenges associated with detecting statistically meaningful changes in ocean carbon and acidity following CO2 emissions reductions, and reminds the reader that it may be difficult to observe intentional emissions reductions — such as those that we may enact to meet the Paris Climate Agreement – in the ocean carbon system.

Figure caption: The fingerprint (pink line) of COVID-related CO2 emissions reductions in global-mean surface ocean pH and air-sea DpCO2, as estimated by an ensemble of COVID-like simulations in an Earth system model.   While the pH fingerprint is not particularly exciting, the air-sea DpCO2 fingerprint displays a temporary weakening of the ocean carbon sink in 2021 due to COVID emissions reductions.

 

Authors:
Nikki Lovenduski (University of Colorado Boulder)
Neil Swart (Canadian Centre for Climate Modeling and Analysis)
Adrienne Sutton (NOAA Pacific Marine Environmental Laboratory)
John Fyfe (Canadian Centre for Climate Modeling and Analysis)
Galen McKinley (Columbia University and Lamont Doherty Earth Observatory)
Chris Sabine (University of Hawai’i at Manoa)
Nancy Williams (University of South Florida)

Sea ice loss amplifies CO2 increase in the Arctic

Posted by mmaheigan 
· Thursday, January 7th, 2021 

Warming and sea ice loss over the past few decades have caused major changes in sea surface partial pressure of CO2 (pCO2) of the western Arctic Ocean, but detailed temporal variations and trends during this period of rapid climate-driven changes are not well known.

Based on an analysis of an international Arctic pCO2 synthesis data set collected between 1994-2017, the authors of a recent paper published in Nature Climate Change observed that summer sea surface pCO2 in the Canada Basin is increasing at twice the rate of atmospheric CO2 rise. Warming, ice loss and subsequent CO2 uptake in the Basin are amplifying seasonal pCO2 changes, resulting in a rapid long-term increase. Consequently, the summer air-sea CO2 gradient has decreased sharply and may approach zero by the 2030s, which is reducing the basin’s capacity to remove CO2 from the atmosphere. In stark contrast, sea surface pCO2 on the Chukchi Shelf remains low and relatively constant during this time frame, which the authors attribute to increasingly strong biological production in response to higher intrusion of nutrient-rich Pacific Ocean water onto the shelf as a result of increased Bering Strait throughflow. These trends suggest that, unlike the Canada Basin, the Chukchi Shelf will become a larger carbon sink in the future, with implications for the deep ocean carbon cycle and ecosystem.

As Arctic sea ice melting accelerates, more fresh, low-buffer capacity, high-CO2 water will enter the upper layer of the Canada Basin, which may rapidly acidify the surface water, endanger marine calcifying organisms, and disrupt ecosystem function.

Figure. 1: TOP) Sea surface pCO2 trend in the Canada Basin and Chukchi Shelf. The grey dots represent the raw observations of pCO2, black dots are the monthly mean of pCO2 at in situ SST, and red dots are the monthly means of pCO2 normalized to the long-term means of SST. The arrows indicate the statistically significant change in ∆pCO2. BOTTOM) Sea ice-loss amplifying surface water pCO2 in the Canada Basin. Black dots represent the initial condition for pCO2 and DIC at -1.6 ℃. The arrows indicate the processes of warming (red), CO2 uptake from the atmosphere (green), dilution by ice meltwater (blue). The yellow shaded areas indicate the possible seasonal variations of pCO2, which are amplified by the synergistic effect of ice melt, warming and CO2 uptake.

Authors:
Zhangxian Ouyang (University of Delaware, USA),
Di Qi (Third Institute of Oceanography, China),
Liqi Chen (Third Institute of Oceanography, China),
Taro Takahashi† (Columbia University, USA),
Wenli Zhong (Ocean University of China, China),
Michael D. DeGrandpre (University of Montana, USA),
Baoshan Chen (University of Delaware, USA),
Zhongyong Gao (Third Institute of Oceanography, China),
Shigeto Nishino (Japan Agency for Marine-Earth Science and Technology, Japan),
Akihiko Murata (Japan Agency for Marine-Earth Science and Technology, Japan),
Heng Sun (Third Institute of Oceanography, China),
Lisa L. Robbins (University of South Florida, USA),
Meibing Jin (International Arctic Research Center, USA),
Wei-Jun Cai* (University of Delaware, USA)

Warming counteracts acidification in temperate crustose coralline algae communities

Posted by mmaheigan 
· Friday, November 6th, 2020 

Seawater carbonate chemistry has been altered by dramatic increases in anthropogenic CO2 release and global temperatures, leading to significant changes in rocky shore habitats and the metabolism of most marine organisms. There has been recent interest in how these anthropogenic stresses affect crustose coralline algae (CCA) communities because CCA photosynthesis and calcification are directly influenced by seawater carbonate chemistry. CCA is a foundation species in temperate macroalgal communities, where species succession and rocky shore community structure are particularly susceptible to anthropogenic disturbance. In particular, the disappearance of turf and foliose macroalgae caused by climate change and herbivore pressure results in the dominance of CCA (Figure 1a).

Figure 1: (a) Examples of crustose coralline algae (CCA)-dominated seaweed bed in the East Sea of Korea showing barren ground dominated by CCA (bright white and pink color on the rock; see arrows) on a rocky subtidal zone grazed by sea urchins. (b) Specific growth rate of marginal encrusting area under future climate conditions.

In a recent study published in Marine Pollution Bulletin, the authors conducted a mesocosm experiment to investigate the sensitivity of temperate CCA Chamberlainium sp. to future climate stressors, as simulated by three experimental treatments: 1) Acidification: doubled CO2; 2) Warming: +5ºC; and 3) Greenhouse: doubled CO2 and +5ºC. After a 47-day acclimation period, when compared with present-day (control: 490 μatm and 20ºC) conditions, the Acidification treatment showed decreased photosynthesis rates of Chamberlainium sp, whereas the Warming treatment showed increased photosynthesis. The Acidification treatment also showed reduced encrusting growth rates relative to the Control, but when acidification was combined with warming in the Greenhouse treatment, encrusting growth rates increased substantially (Figure 1b). Taken together, these results suggest that the negative ecophysiological responses of Chamberlainium sp to acidification are ameliorated by elevated temperatures in a greenhouse world. In other words, if the foliose macroalgal community responses negatively in the greenhouse environment, the dominance of CCA will increase further, and the biodiversity of the algae community will be reduced.

 

Authors:
Ju-Hyoung Kim (Faculty of Marine Applied Biosciences, Kunsan National University)
Il-Nam Kim (Department of Marine Science, Incheon National University)

Timing matters: Correcting float-based measurements of diurnal oxygen variability

Posted by mmaheigan 
· Friday, November 6th, 2020 

Despite its fundamental importance to the global carbon cycle, climate, and marine ecosystems, oceanic primary production is grossly under-sampled. Autonomous platforms represent an important frontier for expanding measurements of marine primary productivity in time and space, but this requires the establishment of robust, standardized methods to obtain reliable data from these platforms. Using data from profiling floats deployed in the northern Gulf of Mexico, authors of a recent study published in Biogeosciences demonstrated, for the first time, that daily cycles of dissolved oxygen can be observed with Argo-type profiling floats. The floats were instructed to profile continuously, resulting in about one profile every three hours. The floats recorded data both on the ascent (upcast) and the descent (downcast). Adjacent casts showed hysteresis in gradient areas, i.e. a lag in the concentration measurement, due to the slow response time of oxygen sensors.

Figure 1: Example of raw oxygen measurements from a downcast (dark purple line) and an upcast (dark green line) and corrected profiles (lighter purple and green lines) in (a) density and (b) pressure coordinates. (c) Upcasts and downcasts (top 150 m) plotted against each other with raw data (purple) and data corrected according to the new method (red). (d) The root-mean-square difference (RMSD) between the upcast and downcast after correcting casts for a range of time constants (τ), showing an optimal τ value in this case of 76 s (red dot).

To correct for these measurement errors, the authors developed a method to determine sensor response time in situ, using an established process for correcting sensor response time errors. This method requires a timestamp associated with each observation. The response time parameter (τ) was determined by correcting consecutive profiles taken in opposite directions using a range of possible values and finding the minimum root-mean-square-difference between them (Figure 1). In light of these findings, future oxygen measurements from Argo floats should be transmitted with time stamps for a calibration period during which up- and downcasts are recorded to facilitate response time correction. The method developed here will contribute to more accurate measurement of dissolved oxygen, thus improving the quality of derived quantities such as primary productivity.

 

Authors
Christopher Gordon (Dalhousie University)
Katja Fennel (Dalhousie University)
Clark Richards (Fisheries and Oceans Canada)
Nick Shay (University of Miami)
Jodi Brewster (University of Miami)

Will global change “stress out” ocean DOC cycling?

Posted by mmaheigan 
· Tuesday, September 29th, 2020 

The dissolved organic carbon (DOC) pool is vital for the functioning of marine ecosystems. DOC fuels marine food webs and is a cornerstone of the earth’s carbon cycle. As one of the largest pools of organic matter on the planet, disruptions to marine DOC cycling driven by climate and environmental global changes can impact air-sea CO2 exchange, with the added potential for feedbacks on Earth’s climate system.

Figure 1. Simplified view of major dissolved organic carbon (DOC) sources (black text) and sinks (yellow text) in the ocean.

Since DOC cycling involves multiple processes acting concurrently over a range of time and space scales, it is especially challenging to characterize and quantify the influence of global change. In a recent review paper published in Frontiers in Marine Science, the authors synthesize impacts of global change-related stressors on DOC cycling such as ocean warming, stratification, acidification, deoxygenation, glacial and sea ice melting, inflow from rivers, ocean circulation and upwelling, and atmospheric deposition. While ocean warming and acidification are projected to stimulate DOC production and degradation, in most regions, the outcomes for other key climate stressors are less clear, with much more regional variation. This synthesis helps advance our understanding of how global change will affect the DOC pool in the future ocean, but also highlights important research gaps that need to be explored. These gaps include for example a need for studies that allow to understand the adaptation of degradation/production pathways to global change stressors, and their cumulative impacts (e.g. temperature with acidification).

 

 
Authors:
C. Lønborg (Aarhus University)
C. Carreira (CESAM, Universidade de Aveiro)
Tim Jickells (University of East Anglia)
X.A. Álvarez-Salgado (CSIC, Instituto de Investigacións Mariñas)

The curious role of organic alkalinity in seawater carbonate chemistry

Posted by mmaheigan 
· Wednesday, August 5th, 2020 

The marine chemistry community has measured organic alkalinity in coastal and estuarine waters for over two decades. While the common perception is that any unaccounted alkalinity should enhance seawater buffer capacity, the effects of organic alkalinity on this buffering capacity, and hence the potential CO2 uptake by coastal and estuarine systems are still not well quantified.

In a thought experiment recently published in Aquatic Geochemistry, the author added organic alkalinity to model seawater (salinity=35, temperature=15˚C, pCO2=400 µatm) in the form of 1) organic acid (HOA) and 2) its conjugate base (OA–). Results suggest that the weaker organic acid/conjugate base pair (pKa ~8.2-8.3) yields the greatest buffering capacity under the simulation conditions. However, the HOA addition first displaces dissolved inorganic carbon (DIC) and causes CO2 degassing; the resultant seawater buffer capacity can be greater or less than the original seawater, depending on the pKa. In comparison, OA– addition leads to CO2 uptake and elevated seawater buffer capacity. As the organic anions are remineralized via biogeochemical processes, a “charge transfer” results in quantitative conversion to carbonate alkalinity (CA), which is overpowered by the concomitant CO2 production (∆DIC>∆CA). Overall, the complete process (organic alkalinity addition and remineralization) results in a net CO2 release from seawater, regardless of whether it is added in the form of HOA or OA–.

Figure caption: A schematic illustration of the role of organic alkalinity on seawater carbonate chemistry in an open system (constant CO2 partial pressure). Organic acid (HOA) addition leads to CO2 degassing and varying seawater buffer (greater or lower than the original seawater) as a function of Ka. Organic base (OA–) addition causes initial CO2 uptake and overall elevated seawater buffer. Regardless, upon complete remineralization, more CO2 is produced than the amount of net gain in carbonate alkalinity (OA– addition only). Therefore, the complete process (organic acid/base addition and its ultimate remineralization) should result in net CO2 degassing.

While the presence of organic alkalinity may increase seawater buffer capacity to some extent (depending on the pKa values of the organic acid), CO2 degassing from the seawater, because of both the initial organic acid addition and eventual remineralization of organic molecules, should be the net result. However, modern alkalinity analysis precludes the bases of stronger organic acids (pKa < 4.5). This fraction of “potential” alkalinity, especially from river waters, remains a relevant topic for future alkalinity cycle studies. The potential alkalinity can be converted to bicarbonate through biogeochemical reactions (or charge transfer at face value), although it is unclear how significant this potential alkalinity is in rivers that flow into the ocean.

 

A backstory
The author used an example of vinegar and limewater (calcium hydroxide solution), which is employed by many aquarists to dose alkalinity and calcium in hard coral saltwater tanks, to demonstrate the conversion of organic base (acetate ion) to bicarbonate and CO2 via complete remineralization. It is also known the added vinegar helps microbes to remove excess nitrate. This procedure had been in the author’s memory for the past nine years, ever since his previous research life when he participated in a study at a coral farm in a suburb of Columbus, Ohio. A strong vinegar odor would arise every now and then at the facility. However, a recent communication with the facility owner suggests that this memory was totally false and the owner simply used vinegar to get rid of lime (CaCO3) buildup in the water pumps. Nonetheless, the chemistry in this paper should still hold, with that false memory serving as the inspiration.

 

Author:
Xinping Hu (Texas A&M University-Corpus Christi)

Diatoms commit iron piracy with stolen bacterial gene

Posted by mmaheigan 
· Tuesday, February 4th, 2020 

Since diatoms carry out much of the primary production in iron-limited marine environments, constraining the details of how these phytoplankton acquire the iron they need is paramount to our understanding of biogeochemical cycles of iron-depleted high-nutrient low-chlorophyll (HNLC) regions. The proteins involved in this process are largely unknown, but McQuaid et al. (2018) scientists described a carbonate-dependent uptake protein that enables diatoms to access inorganic iron dissolved in seawater. As increasing atmospheric CO2 results in decreased seawater carbonate ion concentrations, this iron uptake strategy may have an uncertain future. In a recent study published in PNAS, authors used CRISPR technology to characterize a parallel uptake system that requires no carbonate and is therefore not impacted by ocean acidification.

This system targets an organically complexed form of iron (siderophores, molecules that bind and transport iron in microorganisms) that is only produced by co-occurring microbes. Two genes are required to convert siderophores from a potent toxicant to an essential nutrient. One of these (FBP1) is a receptor that was horizontally acquired from siderophore-producing bacteria. The other (FRE2) is a eukaryotic reductase that facilitates the dissociation of Fe-siderophore complexes.

Figure caption: (A) Growth curves of diatom cultures ( • = WT, ◇ = ΔFBP1, ☐ = ΔFRE2) in low iron media. (B) Growth in same media with siderophores added. (C) Diatoms under 1000x magnification, brightfield. (D) mCherry-FBP1. (E) Plastid autofluorescence. (F) YFP-FRE2. (G) Phylogenetic tree of FBP1 and related homologs.

Are diatoms really stealing siderophores from hapless bacteria? The true nature of this interaction is unknown and may at times be mutualistic. For example, when iron availability limits the carbon supply to a microbial community, heterotrophic bacteria may benefit from using siderophores to divert iron to diatom companions. Further work is needed to understand the true ecological basis for this interaction, but these results suggest that as long as diatoms and bacteria co-occur, iron limitation in marine ecosystems will not be exacerbated by ocean acidification.

Authors:
Tyler Coale (Scripps Institution of Oceanography, J.Craig Venter Institute)
Mark Moosburner (Scripps Institution of Oceanography, J.Craig Venter Institute)
Aleš Horák (Biology Centre CAS, Institute of Parasitology, University of South Bohemia)
Miroslav Oborník (Biology Centre CAS, Institute of Parasitology, University of South Bohemia)
Katherine Barbeau (Scripps Institution of Oceanography)
Andrew Allen (Scripps Institution of Oceanography, J.Craig Venter Institute)

Also see joint post on the GEOTRACES website

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