Ocean Carbon & Biogeochemistry
Studying marine ecosystems and biogeochemical cycles in the face of environmental change
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Archive for New OCB Research

Arctic fjord fungi help lock carbon into the seafloor

Posted by mmaheigan 
· Monday, September 28th, 2026 

What determines whether freshly produced organic carbon is stored in Arctic fjord sediments or quickly returned to the atmosphere as CO₂? While bacteria have long been considered the dominant microbial players in this process, the role of marine fungi has remained largely unexplored.

Figure caption: In Arctic fjords, fungi living in the sediments promote retention of labile dissolved organic matter that exists as free amino acids. This is made possible by a high metabolic efficiency, whereby the fungi assimilate more amino acids into their biomass compared to bacteria. When bacteria dominate the amino acid assimilation, they produce more CO2 from respiration compared to fungi and less carbon is stored in the sediments. (Created with AI)

 

 

We investigated microbial carbon cycling across Kongsfjorden, Svalbard, an arctic fjord that is considered a sentinel ecosystem for arctic change.  Using quantitative stable isotope probing with ¹³C- and ¹⁵N-labeled amino acids, we tracked which microbes incorporated labile dissolved organic matter. Within the arctic fjord sediments, fungi actively assimilated this carbon with relatively high metabolic efficiency.  In other words, greater fungal activity resulted in lower carbon remineralization to CO2.  This coincided with higher fungi-to-prokaryote biomass ratios, indicating that efficient fungal metabolism promotes carbon retention in the sediments as microbial biomass.  This process was dominated by diverse fungal taxa in the aquatic hyphomycetes genus Alatospora, which was distinct from the terrestrial fungal community surrounding the fjord. Fungi have long been known to promote carbon retention in soils as biomass, and our findings show that fungal activity and metabolism also helps stabilize organic carbon before it is buried in Arctic fjord sediments.

As Arctic fjords undergo rapid warming and glacial change, understanding how microbial communities regulate carbon storage becomes increasingly important for predicting future carbon sequestration in these globally significant coastal ecosystems.

 

Authors
Juan Carlos Trejos-Espeleta (Ludwig-Maximilians-Universität München)
James A. Bradley (Aix Marseille University; University of Toulon; Centre national de la recherche scientifique; Institut de Recherche pour le Développement; Mediterranean Institute of Oceanography)
Ömer K. Coskun (Ludwig-Maximilians-Universität München)
Laura M. Wehrmann (Stony Brook University)
Gonzalo V. Gomez-Saez (Ludwig-Maximilians-Universität München)
William D. Orsi (Ludwig-Maximilians-Universität München; Aix Marseille University; Queen Mary University of London; Stony Brook University)

Citation: Trejos-Espeleta JC, Bradley JA, Coskun ÖK, Wehrmann LM, Gomez-Saez GV, Orsi WD (2026) Fungi enhance microbial carbon retention in high Arctic fjord sediment. PLoS Biol 24(6): e3003783. https://doi.org/10.1371/journal.pbio.3003783

Taking a Ride on the C-SAW

Posted by mmaheigan 
· Monday, September 28th, 2026 

Those of us working across the land-ocean aquatic continuum (LOAC), aka the terrestrial-aquatic interface (TAI), aka estuaries and coastal waters, often note that our estuaries and coastal waters tend to get darker after large rain events. The “darkness” comes from substances that absorb and scatter light and a good portion of these materials are collectively called colored (or chromophoric) dissolved organic matter – CDOM. These observations beg the question of where the CDOM comes from and if its quality, related to its origin and its biogeochemical reactivity, varies substantially arising from storm events.

In recent work published in Limnology and Oceanography the authors looked at this question using a time series of observations from coastal North Carolina’s Neuse River Estuary, a major tributary to the Pamlico Sound, the largest lagoonal estuary in the United States. Looking at time series enabled us to translate the 2D and 3D of the LOAC into a 4D perspective and capture spatiotemporal variations that might allow us to understand different states of the estuary over time and in response to extreme weather events.

Figure caption: Conceptual model of the carbon source and weather (C-SAW) paradigm. Left panel represents dry conditions when a coastal river is not connected to its adjacent wetlands. Under wet periods (right panel), extreme rainfall floods adjacent wetlands, hydrologically connecting them to the river and leading to enhanced export of color, DOM, and nitrogen and phosphorus nutrients (N + P). Upstream river and downstream estuarine phytoplankton populations are represented as light green rods and dark green spheres, respectively.

 

We found both event-driven weather signals and basin-wide climate signals explained a surprisingly major shift in the quality of CDOM in the lower estuary and Pamlico Sound. Wet periods exhibited higher CDOM and dissolved organic carbon (DOC) concentrations – not unexpected – but overwhelmingly the sources shifted from an upland river dominance to a wetland dominance. This meant that climate change, creating wetter periods that saturate low-lying coastal landscapes, poises them to export tremendous amounts of CDOM and DOC stored in them during intense precipitation events. We conceptualized this paradigm as a “C-SAW”: carbon source and weather, which integrates elements of the Flood Pulse and Pulse-Shunt Concepts, linking them to estuarine and coastal biogeochemistry.

The C-SAW describes system state changes in the dynamic biogeochemical reactors that are estuaries. Overloading these systems with organic matter and nutrients from the landscape primes the reactor to process this organic matter back into CO2. However, DOM is quite diverse and arises from natural and anthropogenic sources, so questions remain surrounding how shifting climatic states might translate into shifting organic matter processing. On a global scale this can be significant in terms of exporting more carbon (and color) to coastal waters, impacting water quality and water clarity, as well as carbon cycling.

 

Author
Chris Osburn (North Carolina State University)

 

Citation: Osburn, C.L., Bianchi, T.S., Paerl, H.W., Hall, N.S., Hounshell, A.G., Rudolph, J.C., Bhattacharya, R. and Paerl, R.W. (2026), Carbon source and weather in coastal North Carolina. Limnol Oceanogr, 71: e70426. https://doi.org/10.1002/lno.70426

 

Learn more about the related OCB scoping workshop in 2022 C-saw Time domain controls on carbon storage, release, and transformation in coastal and estuarine waters following extreme events

Sinking phytodetrital aggregates and fecal pellets produced by mesopelagic crustaceans seed deep-sea particle communities in the Southern Ocean

Posted by mmaheigan 
· Monday, September 28th, 2026 

How do processes in the sub-surface ocean (500 – 1000 m) impact particle communities that sink into the deep ocean (> 3000 m)? We highlight two observed pathways of particle flux to the deep sea from two ocean basin-wide cruises in the Southern Ocean sampled with an Underwater Vision Profiler (UVP5), which is an underwater camera that measures particle size and takes photographs of larger particles in a recent study in  GBC. The first pathway was a high-biomass event consisting of large, transparent, fluffy aggregates, likely of phytodetrital origin. The particle morphology does not change much from the surface to the deep sea (>3000 m), indicating quickly sinking particles without undergoing much transformation. However, in another region we observed a high abundance of copepods and other crustaceans in the subsurface ocean (from 500 – 1000 m), of which at least 78% of the copepods were in active posture, and presumably feeding. We observed elevated abundance of fecal pellets and degraded fecal pellets below this region, which increased with depth, particularly from 3000 – 6000 m. We posit that this mesopelagic grazing event facilitates enhanced deep carbon export by repackaging slower-sinking aggregates into denser-packed feces. We urge more study of full water column processes, rather than just surface or upper mesopelagic processes, when studying the fate of particles sinking due to the biological carbon pump. We also encourage the use of particle and plankton morphology to shed light on the ecological processes that facilitate particles reaching the deep ocean.

Figure 1: Conceptual diagram: (a) The fluffy aggregate flux pathway, where high surface chlorophyll-a waters show elevated abundance of large fluffy aggregates and grazers at the surface. Fluffy aggregates sink into the deeper ocean and down to the seafloor. (b) The zooplankton-mediated flux pathway, where high abundance of crustacean grazers in the lower mesopelagic also has elevated small particle abundance from sloppy feeding. An increasing abundance of fecal pellets and degraded fecal pellets was observed in the abyssopelagic zone. Relative and total abundance of different types of detrital particles averaged over different depth bins from the (c) fluffy aggregate flux pathway and (d) zooplankton-mediated flux pathway and different types of crustaceans in (e) and (f), respectively. (g) Highlights example images of copepods in actively feeding posture from 500 to 1000 m in the zooplankton-mediated flux pathway.

 

Author
Stephanie O’Daly, University of Washington

 

Citation: O’Daly, S. H., Hennon, G. M. M., Kelly, T. B., Kiko, R., Lekanoff, R. M., Pretty, J. L., et al. (2026). High-resolution particle imaging reveals the importance of phytodetrital aggregate flux and mesopelagic grazing for carbon storage in the Southern Ocean. Global Biogeochemical Cycles, 40, e2025GB008685. https://doi.org/10.1029/2025GB008685

The North Atlantic’s microscopic carbon traffic controllers

Posted by mmaheigan 
· Friday, August 14th, 2026 

Each year, as the North Atlantic transitions from turbulent spring mixing to layered summer stratification, a key question emerges: How do these seasonal changes reshape bacterial host-virus interactions and control carbon flux?

In a recent study published in Microorganisms, researchers show that seasonal stratification regulates viral activity by modulating encounter rates between viruses and distinct bacterial hosts. They found that one viral group (V1) is tightly coupled with high nucleic acid (HNA) bacteria in stratified surface waters, whereas another (V2) preferentially interacts with low nucleic acid (LNA) cells in the deeper, well-mixed layers. These patterns indicate that physical layering structures viral dynamics by regulating host distribution and ecological traits. Importantly, the study reveals a growth-dependent shift in viral infection strategy. The induction of temperate viruses increases with host growth rate up to a metabolic threshold (~0.1 d⁻¹), then declines as lytic infection becomes dominant. This finding challenges the traditional paradigm that lysogeny is favored under low-productivity conditions, instead suggesting that lysogeny may play a key role in fast-growing, r-selected host-virus systems.

These results highlight how viruses act as microscopic carbon traffic controllers, regulating the balance between microbial recycling and carbon export across seasonal transitions. During the shift toward stronger stratification, virus-driven lysis redirects up to 47% of bacterial carbon into dissolved pools each day, reinforcing the dominance of the microbial loop. Yet, under certain conditions, viral lysis may also inject carbon into deeper waters, enhancing export and the efficiency of the biological carbon pump. It is essential to understand these shifting pathways to predict how ocean stratification reshapes carbon cycling in a changing climate.

 

Authors:
Yean Das (The University of Southern Mississippi)
Corina P. D. Brussaard (NIOZ Royal Netherlands Institute for Sea Research & University of Amsterdam)
Kristina D. A. Mojica (The University of Southern Mississippi)

Citation:
Das, Y., Brussaard, C. P. D, & Mojica, K. D. (2025). Heterotrophic Prokaryote Host–Virus Dynamics During Spring in the Northeast Atlantic Ocean. Microorganisms, 13(11), 2474. https://doi.org/10.3390/microorganisms13112474

Impacts of warming and circulation slowdown on future ocean carbon cycle feedback

Posted by mmaheigan 
· Friday, August 14th, 2026 

The ocean has absorbed a quarter of anthropogenic CO2 emissions, mitigating changes. However, predicting the future fate of this ‘sink’ is challenging as marine carbon is regulated by a complex set of interacting processes that respond differently to warming. Our recent study teases apart these interactions with a novel mechanistic carbon decomposition and attribution framework applied to an ocean biogeochemical model driven by output from a climate model, to quantify the impact of changes in different forcing factors, such as warming and circulation, on marine carbon storage and the consequent feedback on atmospheric CO2.

Figure: (a) Waterfall chart attributing changes in atmospheric CO2 (pCO2atm) (relative to a simulation with no climate change; NCC) to different carbon components for the SSP5-8.5 high-emission scenario. Each bar represents a component with its height corresponding to the (positive or negative) change in pCO2atm due to that component. The cumulative change in pCO2atm as successive components are added is shown from left to right. Subscripts are: sat=saturation, dis=disequilibrium, soft=soft tissue remineralization, caco3=CaCO3 dissolution, phy=physical process, and bio=biological process. (b) Compensation ratio of change (∆) in preformed to regenerated carbon with respect to NCC in the Temperature (solid lines) and Circulation (dashed lines) attribution experiments for the four emission scenarios studied as a function of time. (c) Change in carbon components with respect to NCC in year 2500 due to temperature under the SSP1-2.6 low-emission scenario. (d) Change in carbon components with respect to NCC in year 2500 due to circulation under SSP5-8.5.

We find that under a high-emission scenario, global warming reduces marine carbon storage and raises atmospheric CO2 in 2500 by ~270 ppm (Fig panel a), a positive feedback. This is due to a decrease in ocean CO2 uptake (Csat,phy), compensated in part by an increase in biologically regenerated carbon (Csoft & Ccaco3). While previous studies have also found this compensation, they have ascribed it largely to a slowdown in ocean circulation. Our attribution experiments instead show that the degree of compensation depends strongly on the process and emission scenario (Panel b). Reduced CO2 uptake due to a slower circulation is half-compensated by increased regenerated carbon under high emissions, but almost exactly compensated for under the lowest emission scenario (dashed lines). On the other hand, temperature-driven changes in uptake and regeneration are mostly uncompensated (solid lines); the direct effects of warming thus dominate under low-emission, high-mitigation scenarios, while also contributing a third of the decrease in carbon storage at the highest emissions. Air-sea disequilibrium, as revealed by the carbon decomposition, provides an explanation. Warming enhances physical disequilibrium because of an increase in the meridional sea surface temperature gradient; this is the leading cause of the decrease in carbon storage under low emissions (Panel c). In contrast, for high emissions (Panel d) a slowdown in circulation decreases physical disequilibrium, amplifying the impact of increased biological carbon sequestration in compensating for reduced CO2 uptake. In summary, temperature dominates the climate-carbon cycle feedback for low emission scenarios, and circulation for high emission scenarios. This study provides new mechanistic insights into how the marine carbon cycle responds to change, and highlights the need for accurate partitioning of carbon components in Earth System Models.

 

Authors:
Samar Khatiwala (Waseda University)
Olivia Strachan (Independent Researcher)
Andreas Schmittner (Oregon State University)

Citation: Khatiwala, S., O. Strachan and A. Schmittner (2026). Multi-centennial response of marine carbon pumps to global warming, Nature Climate Change, https://doi.org/10.1038/s41558-026-02686-x.

Research Briefing (accompanying the main article): Warming dominates over circulation slowdown in reducing marine carbon storage under high-mitigation scenarios, Nature Climate Change, https://doi.org/10.1038/s41558-026-02687-w.

Do ecological feedbacks matter in a changing world?

Posted by mmaheigan 
· Friday, August 14th, 2026 

Interactions among organisms shape ecological dynamics, while exchanges with the environment alter physical and chemical conditions. Examples of these include predator-prey dynamics (biotic interaction), the release of nutrients through excretion (chemical changes), or the development of coral reefs (physical changes). Together, these processes can generate feedback loops, which may amplify or buffer the impacts of environmental change. We know such processes are important in ecosystems, but do ecological feedbacks really matter at larger scales and in the wider Earth system? To address this question, authors of a recent study published in Earth’s Future, compiled what is known about how ecological feedbacks operate, drawing on examples from ecosystems in marine, terrestrial and freshwater habitats across the world.

Figure caption: A wide range of ecological feedbacks influence the functioning of coral reef systems, affecting the structure and functioning of the ecosystem and associated physical and biogeochemical processes. Figure modified from Murphy et al. (2025), originally published in Earth’s Future, © The Authors, published by the American Geophysical Union under a Creative Commons license.

The synthesis highlights that ecological feedbacks are ubiquitous within and across ecosystems, yet remain a major gap in Earth system science. Ecological feedbacks can affect ecosystem structure and resilience, tipping points, global biogeochemical cycles, and the structure and dynamics of the physical environment. The study emphasises that current Earth System models often underrepresent these processes, despite their importance for carbon cycling, climate regulation, and ecosystem stability. Representing them appropriately is not trivial. Feedbacks operate across spatial (local to global) and temporal (seconds to centuries) scales, and are integral in multiple Earth system processes. A systematic approach is needed to both develop our understanding of ecological feedbacks and refine models, which will require increased integration of ecosystem and Earth system research. Overall, these findings matter because failing to account for ecological feedbacks could lead to inaccurate climate projections, misguided policy decisions, and unanticipated ecological losses.

Authors
Eugene Murphy (British Antarctic Survey)
Jessica Williams (Imperial College London)
Emma Cavan (Imperial College London)

 

Follow and learn more:
www.bas.ac.uk, IMBeR, ICED, SCOR, Future Earth, imber-youtube

@britishantarcticsurvey, @imber, @scor-int.bsky.social, @futureearth

https://www.bas.ac.uk/profile/ejmu/

https://profiles.imperial.ac.uk/jessica.williams15

https://profiles.imperial.ac.uk/e.cavan/about

 

Some extra background:
The study developed from scientific activities of the Integrating Climate Ecosystem Dynamics in the Southern Ocean (ICED) programme and the Integrated Marine Biosphere Research Project (IMBeR). ICED is a regional programme of IMBeR, which is a Large-Scale Ocean Research Project under the Scientific Committee on Oceanic Research (SCOR) and a Global Research Network under Future Earth. Improving understanding of ecological feedbacks in the Earth system was developed as an Innovation Challenge of IMBeR, with a conference session on the topic held at the Future Oceans 2 conference. Following subsequent discussions, and a recognition of the connected nature of ecosystems across the world, the study expanded to develop an integrated view encompassing marine, terrestrial and freshwater systems.

 

Citation: Murphy, E. J., Williams, J. J., Myers-Smith, I. H., Groner, V. P., Jacoby, D. M. P., Kwiatkowski, L., Melbourne-Thomas, J., Ransome, E., Banks-Leite, C., Bopp, L., Gehlen, M., Hofmann, E. E., Hoogakker, B., Johnston, N. M., Malhi, Y., & Cavan, E. L. (2026). Ecological Feedbacks in the Earth System. Earth’s Future, 14(2), e2025EF006478. https://doi.org/10.1029/2025EF006478

 

Beyond carbonate chemistry: Biogenic silica dissolution may weaken carbon sequestration under ocean alkalinity enhancement

Posted by mmaheigan 
· Friday, August 14th, 2026 

Ocean alkalinity enhancement (OAE) is a promising carbon dioxide removal strategy, yet evaluating its net carbon removal potential requires understanding not only seawater carbonate chemistry, but also biological feedbacks that may influence long-term carbon sequestration. While most OAE studies focus on resolving immediate responses during biomass production, much less attention is paid to processes occurring during particle sinking.

In a 39-day mesocosm experiment in the North Sea, a recent study investigated how phytoplankton bloom development and the composition of sinking particles responded to CO2-unequilibrated OAE (ΔTAmax = 1250 μmol kg-1). Although phytoplankton blooms were delayed, their overall magnitude and organic carbon export remained largely unchanged across the OAE gradient. In contrast, elevated pH (up to 9.25) enhanced the dissolution of diatom-derived silica during particle sinking, reducing silica ballasting ratios (BSi:POC) by up to 60%. This response is consistent with the well-established pH sensitivity of biogenic silica dissolution. Following bloom senescence, the degradation of protective organic coatings surrounding diatom frustules exposes biogenic silica to naturally undersaturated seawater, where elevated pH further accelerates dissolution.

Figure caption: A conceptual illustration of the North Sea mesocosm experiment investigating CO₂-unequilibrated OAE across a broad alkalinity gradient generated through different dilution scenarios. Original treatment colours and symbols are retained for transparency, although dilution treatments were pooled for the final analysis. Elevated pH enhanced the dissolution of diatom-derived biogenic silica during particle sinking, reducing silica ballasting ratuis (BSi:POC). The inset compares bloom-averaged water column (dashed regression, R2 = 0.56, p < 0.01) and deposition-averaged sediment trap (solid regression, R2 = 0.74, p < 0.01) silica ballasting ratios, illustrating that silica loss intensified during particle sinking. Graphics adapted from Integration and Application Network, University of Maryland Center for Environmental Science, https://ian.umces.edu/symbols/.

Because silica ballasting influences the depth at which sinking organic matter is remineralized, reduced silica preservation may shoal carbon remineralization and shorten carbon sequestration timescales, even when export production remains unchanged. The study highlights an export-phase process that has received little attention in OAE research and should be considered in future field observations and Earth system models evaluating the net carbon sequestration efficacy of OAE.

Authors
Philipp Suessle (University of the Azores)
Kai Georg Schulz (Southern Cross University, Geomar Helmholtz-Centre for Ocean Research)
Joana Barcelos e Ramos (University of the Azores)
Nico Manuel Sievers (Geomar Helmholtz-Centre for Ocean Research)
Julieta Schneider (Southern Cross University, Geomar Helmholtz-Centre for Ocean Research)
Juliane Katharina Tammen (Geomar Helmholtz-Centre for Ocean Research)
Leila Kittu (Geomar Helmholtz-Centre for Ocean Research)
Laura Marín-Samper (University of Las Palmas de Gran Canaria)
Maarten Boersma (Alfred-Wegener-Institute, Helmholtz-Centre for Polar- and Marine Research)
Ulf Riebesell (Geomar Helmholtz-Centre for Ocean Research)

 

Citation: Suessle, P., Schulz, K. G., Barcelos e Ramos, J., Sievers, N. M., Schneider, J., Tammen, J. K., Kittu, L., Marín-Samper, L., Boersma, M., and Riebesell, U. (2026) Ocean alkalinity enhancement reduces silica ballasting during export due to amplified dissolution, Biogeosciences, 23, 4691–4710, https://doi.org/10.5194/bg-23-4691-2026.

BGC-Argo floats reveal shifting nitrogen cycling in the Eastern Tropical North Pacific

Posted by mmaheigan 
· Friday, August 14th, 2026 

Oxygen-deficient zones are regions of the ocean where microbes consume nitrate in lieu of oxygen. This drives major losses of biologically available nitrogen. In a recent study, we used a BGC-Argo float in the Eastern Tropical North Pacific to remotely observe these processes over nearly three years. Using a new method to extract nitrite from UV nitrate sensor spectra (Bif and Johnson, 2025), the float captured a progressive decline in the secondary nitrite maximum over time, revealing a shift in microbial nitrogen cycling through time.

By combining float observations with a stoichiometric biogeochemical model, we found that nitrogen transformations reorganized in response to changing organic matter supply and redox conditions. The results show that oxygen-deficient zones are highly dynamic environments rather than stable systems. This also demonstrates how autonomous observing platforms can now monitor hidden nitrogen and carbon cycling processes across the global ocean in near real time.

Figure. BGC-Argo float observations in the Eastern Tropical North Pacific oxygen-deficient zone. (a) Float WMO#5906484 trajectory. (b) Time-series distribution of nitrite concentrations. The white contour indicates the upper boundary of low-oxygen waters of less than 1 µmol/kg. (c) Nitrate concentrations over the same period. (d–e) Relative contributions of anammox and denitrification estimated with a stoichiometric mass-balance model under contrasting biogeochemical conditions.

Authors:
Mariana B. Bif (University of Miami)
Colette Kelly (Woods Hole Oceanographic Institution, now
Mark A. Altabet (University of Massachusetts Dartmouth)
Annie Bourbonnais (University of South Carolina)
Claire Elbon (University of Washington)
Edgart Flores (University of Colorado Boulder
Alanna Mnich (University of Massachusetts Dartmouth)
Josh Plant (Monterey Bay Aquarium Research Institute (MBARI))
Kenneth S. Johnson (Monterey Bay Aquarium Research Institute (MBARI))

 

 

Citations:

Bif, M.B., & Johnson, K.S., 2025. BGC-Argo floats reveal nitrite and thiosulfate dynamics in the oceans with high spatiotemporal resolution. Global Biogeochemical Cycles, 39, e2024GB008473. https://doi.org/10.1029/2024GB008473

Bif, M.B., Kelly, C., Altabet, M.A., Bourbonnais, A., Elbon, C., Flores, E., Mnich, A., Plant, J. and Johnson, K.S., 2026. BGC-Argo float reveals shifts in nitrogen-carbon cycling in an oxygen-deficient zone. Communications Earth & Environment, 7(1), p.294. https://www.nature.com/articles/s43247-026-03410-5

Phytoplankton respond more consistently to nutrient pulses than marine heat waves

Posted by mmaheigan 
· Monday, June 29th, 2026 

How do phytoplankton respond to short-term changes in temperature and nutrient availability, and how does this response vary under different baseline conditions?

A recent study perturbed a summer plankton community by manipulating nutrient concentrations and temperature (±4°C) in short-term controlled microcosms to assess the relative impacts of each factor on phytoplankton physiology and community structure. Nutrient amendments rapidly shifted the phytoplankton community towards larger cells, altered elemental stoichiometry, and reduced microzooplankton grazing. Conversely, temperature changed community composition, but had no impact on size or stoichiometry. These results paralleled a similar spring incubation and regional field studies, which together suggest that over short time scales (days) nutrient amendments may produce more consistent and significant impacts on phytoplankton composition and physiology than temperature or grazing. Though temperature is a significant driver of phytoplankton dynamics globally, the impacts of short-term temperature changes, like marine heat waves, may depend on baseline thermal conditions, the starting plankton community, and the availability of nutrients to cope with increased metabolic demands. Understanding baseline conditions will be central to deciphering how short-term temperature changes may impact phytoplankton communities and the ecosystems they support.

Figure caption. Illustrative diagram showing the impacts of short-term nutrient amendments on phytoplankton communities, and the factors that influence the thermal response. Frequency distribution plots show how the community size structure <20 µm differed between the nutrient amended treatment (solid) and the control (white) on day 4 of the incubation experiments, as discerned via flow cytometry forward scatter (FSC).

Authors
Stephanie I. Anderson (University of Rhode Island)
Gayantonia Franzè (University of Rhode Island & Institute of Marine Research)
Joshua D. Kling (University of Southern California)
Paul Wilburn (Michigan State University)
Colin T. Kremer (University of Connecticut)
Susanne Menden-Deuer (University of Rhode Island)
Elena Litchman (Michigan State University)
David A. Hutchins (University of Southern California)
Tatiana A. Rynearson (University of Rhode Island)

Bluesky
@drplankton.bsky.social
@quant-ecology.bsky.social
@elenalitchman.bsky.social
@stephanieianderson.bsky.social

Detecting the ocean’s eddy carbon pump globally—it’s smaller than we thought.

Posted by mmaheigan 
· Monday, June 29th, 2026 

How much carbon do ocean eddies actually pump into the ocean interior? A decade ago, a landmark study (Omand et al, 2015) showed that turbulent eddies at ocean fronts can grab carbon-rich surface water and plunge it hundreds of meters down in a matter of days—back-of-the-envelope extrapolations suggest this “eddy subduction pump” could export as much as 2 Pg of carbon per year (Boyd et al, 2019), roughly a fifth of the entire biological carbon pump. But because these events are small, short-lived, and scattered across every ocean basin, constraining the pump’s true size at the global scale has remained elusive. The authors of a recent study built an algorithm that detects individual subduction events from coincident anomalies in salinity, oxygen, and particulate organic carbon, and applied this algorithm to 126,591 profiles from 941 BGC-Argo floats, identifying 1,333 carbon subduction events concentrated in springtime hotspots in the Southern Ocean and the subpolar North Atlantic. The resulting global export below 200 m is about 0.05 [<0.01–0.28] Pg C yr⁻¹, orders of magnitude smaller than the earlier upper bound, and less than 5% of the total biological pump. The result is in close agreement with an independent global estimate derived from a four-dimensional POC budget (Bellacicco et al., 2025), giving us added confidence that the pump’s true magnitude is modest. This is, somewhat counterintuitively, reassuring news for global carbon budgets. Current Earth System Models cannot resolve the kilometer-scale dynamics behind eddy subduction, but our results suggest they are not missing a first-order term in the ocean carbon cycle.

Figure caption : Spatial distribution of total annual mean POC flux below 200 m from the eddy subduction pump, assuming a constant vertical velocity W = 200 m day⁻¹. Strongest export occurs in the Southern Ocean and subpolar North Atlantic. White stippling marks 5° grid cells without Argo profiles (insufficient coverage).

 

Authors
Maxime Keutgen De Greef
Laure Resplandy
Mathieu A. Poupon
(all Princeton Univ)

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abundance acidification additionality advection africa aggregates air-sea air-sea interactions albedo algae alkalinity allometry amendments ammonium AMO AMOC anoxic Antarctic Antarctica anthro impacts anthropogenic carbon anthropogenic impacts appendicularia aquaculture aquatic continuum aragonite saturation arctic Argo argon arsenic artificial seawater assumptions AT Atlantic atmosphere atmospheric CO2 atmospheric nitrogen deposition authigenic carbonates autonomous platforms AUVs awb bacteria bathypelagic BATS BCG Argo benthic bgc argo bias bio-go-ship bio-optical bioavailability biogeochemical biogeochemical cycles biogeochemical models biogeochemistry Biological Essential Ocean Variables biological pump biomass biophysics bloom blue carbon bottom water boundary layer buffer capacity C14 CaCO3 calcification calcite carbon carbon-climate feedback carbon-sulfur coupling carbon 14 carbonate carbonate chemistry carbonate chemistry OAE carbonate system carbon budget carbon cycle carbon cycling carbon dioxide carbon export carbon fluxes carbon removal carbon sequestration carbon storage Caribbean CCA CCS CDOM changing marine chemistry changing marine ecosystems changing marine environments changing ocean chemistry chemical oceanographic data chemical speciation chemoautotroph chesapeake bay chl a chlorophyll circulation climate clouds CO2 CO3 coastal and estuarine coastal darkening coastal ocean cobalt Coccolithophores commercial community community composition competition conservation cooling effect copepod copepods coral reefs cruise CTD currents cyclone daily cycles data data access data assimilation database data management data product data sets Data standards DCM dead zone decadal trends decomposers decomposition deep convection deep ocean deep sea coral deep water deepwater horizon denitrification dense water deoxygenation depth diatoms DIC diel migration diffusion dimethylsulfide dinoflagellate dinoflagellates discrete measurements disequilibrium distribution DOC DOM domoic acid DOP dust DVM earth system ecological feedbacks ecology economics ecosystem management ecosystems eddy Education EEZ Ekman transport emissions ENSO enzyme equatorial current equatorial regions ESM estuarine and coastal carbon fluxes estuary euphotic zone eutrophication evolution export export fluxes export production extreme events faecal pellets fecal pellets feces feeding filter feeders filtration rates fire fish Fish carbon fisheries fishing fjord float floats fluid dynamics fluorescence food webs forage fish forams framework freshening freshwater frontal zone fronts functional role fungi future oceans gelatinous zooplankton gene transfer geochemistry geoengineering geologic time GEOTRACES glaciers gliders global carbon budget global oceam global ocean global ocean models global overturning circulation global warming go-ship gradient grazing greenhouse gas greenhouse gases Greenland ground truthing groundwater Gulf of Maine Gulf of Mexico Gulf Stream gyre harmful algal bloom heat waves high latitude human food human impact human well-being hurricane hydrogen hydrothermal hypoxia ice age iceberg ice cores ice cover industrial onset inland waters in situ inverse circulation ions iron iron fertilization iron limitation isotopes jellies katabatic winds kelvin waves krill kuroshio lab vs field lagoon land land-ocean continuum larvaceans lateral transport LGM lidar ligands light light attenuation lineage lipids low nutrient machine learning mangroves marine carbon cycle marine heatwave marine particles marine snow marine snowfall marshes mCDR mechanisms Mediterranean meltwater mesocosm mesopelagic mesoscale mesoscale processes metagenome metals methane methods microbes microbial processes microlayer microorganisms microplankton microplastics microscale microzooplankton midwater migration minerals mitigation mixed layer mixed layers mixing mixotrophs mixotrophy model modeling modeling atmosphere model validation mode water molecular diffusion MPT MRV multi-decade N2 n2o NAAMES NCP nearshore net community production net primary productivity new ocean state new technology Niskin bottle nitrate nitrogen nitrogen cycle nitrogen fixation nitrous oxide north atlantic north pacific North Sea NPP nuclear war nutricline nutrient budget nutrient cycles nutrient cycling nutrient limitation nutrients OA observations ocean-atmosphere ocean acidification ocean acidification data ocean alkalinity enhancement ocean carbon uptake & storage ocean carbon uptake and storage ocean color ocean interior ocean modeling ocean observatories ocean warming ODZ oil oligotrophic omics OMZ open ocean optics organic carbon organic particles oscillation outwelling overturning circulation oxidizing oxygen oxygen-deficient pacific paleoceanography PAR parameter optimization parasite particle flux particles partnerships pathway pCO2 PDO peat pelagic perturbation PETM pH phenology phosphate phosphorus photosynthesis physical processes physiology phytoplankton PIC piezophilic piezotolerant plankton POC polar polar regions policy pollutants precipitation predation predator-prey predators prediction pressure primary productivity Prochlorococcus productivity prokaryotes proteins pteropods pycnocline python radioisotopes rain redox remineralization remote sensing repeat hydrography residence time resource management respiration resuspension rivers rocky shore Rossby waves Ross Sea ROV salinity salt marsh satellite scale seafloor seagrass sea ice sea level rise seasonal seasonal effects seasonality seasonal patterns seasonal trends sea spray sea surface seawater collection seaweed secchi sediments sensor sensors sequestration shelf ocean shelf system shells ship-based obs ship-based observations shorelines siderophore silica silicate silicon cycle sink sinking sinking particles size SOCCOM soil carbon solubility pump southern ocean south pacific spatial covariations speciation spring mixing SST state estimation stoichiometry stratification subduction submesoscale subpolar subtropical sulfate surf surface surface ocean surface water surface waters Synechococcus technology teleconnections temperate temperature temporal covariations thermocline thermodynamics thermohaline thorium tidal time time-series time of emergence titration top predators total alkalinity trace elements trace metals trait-based transfer efficiency transient features trawling Tris trophic interactions trophic transfer tropical turbulence twilight zone upper ocean upper water column upwelling US CLIVAR uvp validation velocity gradient ventilation vertical flux vertical migration vertical transport viruses warming water clarity water column water mass water quality waves weathering western boundary currents wetlands winter mixing zooplankton

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