Ocean Carbon & Biogeochemistry
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Archive for News – Page 2

PACE Hackweek

Posted by mmaheigan 
· Friday, February 28th, 2025 

The NASA Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) Project and Ocean Carbon & Biogeochemistry (OCB) Program are hosting a second PACE Data Hackweek. This is a one-week social coding event that will include a combination of lectures, tutorials, and project work (data processing and analysis) that will kick-start research using the Earth science data streams generated by the OCI, SPEXone, and HARP2 instruments on board the observatory. Other projects that combine PACE data with other satellite data, such as from EarthCARE, TROPOMI, or SWOT are also encouraged. Participants will gain behind-the-scenes access to all aspects of PACE.

  • Data and compute resources will be provided on an AWS cloud platform, and tutorials will be conducted in Python. Participants must have some experience (i.e. able to work independently) with Python in order to benefit from this Hackweek. *We will also consider applicants who are proficient in a different programming language who are transitioning to Python.*
  • We anticipate accepting ~40 participants (from student to professional career stages).
  • All lectures and tutorials will be recorded and made available on the course web page.

3-7 August 2025
University of Maryland Baltimore County (UMBC)

Learn more and apply by March 24

Welcoming new SSC members!

Posted by mmaheigan 
· Friday, February 14th, 2025 

Welcome to the four new and one continuing SSC members!

Jason Graff (Oregon State Univ.) (2027) Biooptics, satellite remote sensing

Bror Jönsson (Univ. New Hampshire) (2027) – biological production across land-open ocean continuum, coastal ocean acidification, interactions between physical dynamics in the upper ocean and biological production, phytoplankton dynamics, and air-sea exchange, connectivity combining observations, analysis of large dataset, remote sensing and algorithm development

Jonathan Lauderdale (Massachusetts Inst. of Technology) (2027) –  biogeochemistry, global carbon, nutrient, and trace metal cycles, past climates, physical oceanography, and processes occurring in high latitude regions such as the Southern Ocean.

Sarah Mincks (Univ. Alaska Fairbanks) (2027) benthic-pelagic coupling, marine organism-mediated carbon cycling

Shaily Rahman (Univ Colorado, Boulder) (2027, second term) – marine biogeochemistry and sedimentary processes

Thank you to Jeff Bowman (SIO), Susanne Craig (NASA GSFC), Tim DeVries (UCSB), and Zachary Erickson (NOAA PMEL) for your OCB work over the past three years!

Glimpses of eukaryotic metabolism captured using AUV Clio

Posted by mmaheigan 
· Tuesday, January 28th, 2025 

Marine microeukaryotes are important players in ocean biogeochemistry, contributing to primary production and respiration. Their diversity and function is generally better understood in coastal regions, and harder to study in offshore locations, especially at depth. The CASHEW (Clio Atlantic Sectional Hoedown Ending at Woods Hole) expedition aimed to characterize microeukaryotic community composition and functionality along a gradient in the western North Atlantic Ocean.

Autonomous underwater vehicle (AUV) Clio is a refrigerator sized robot that was used to collect biological material throughout the water column (see photo). This cruise was Clio’s first ocean transect, before this expedition Clio was in a testing phase. Clio was used to survey the upper 1 km of the water column. At one station, Clio was successfully sent 4.1 km down to the sea floor! We used the biomass collected to analyze metatranscriptomes and metaproteomes, which allowed us to examine the identity and metabolic profiles of marine microorganisms.

One of the most interesting aspects of this study was the similarities and differences in biological patterns based on whether transcripts or proteins were considered. While eukaryotic community breakdown was generally consistent between transcripts and proteins, there were more clear signs of heterotrophic taxa at depth in the protein fraction. Transcripts also indicated nitrate stress in continental margin waters with phosphate stress offshore, potentially a result of aerosol dust introducing iron and nitrogen. This study highlights the value of complementary omic datasets when reconstructing microbial community metabolism and showcases the degree of omic resolution possible with AUV efforts.

 

Authors
Natalie Cohen (University of Georgia Skidaway Institute of Oceanography)
Mak Saito (Woods Hole Oceanographic Institution)

New workshop report: Ecological Forecasting

Posted by mmaheigan 
· Wednesday, December 18th, 2024 
New workshop report from the joint OCB-US CLIVAR 2022 workshop Daily to Decadal Ecological Forecasting along North American Coastlines
Capotondi, A., Coles, V. J., Clayton, S., Friedrichs, M., Gierach, M., Miller, A. J., and Stock, C. 2024. Daily to Decadal Ecological Forecasting Along North American Coastlines Workshop Report. 54pp. doi: 10.1575/1912/70991
Citable URI https://hdl.handle.net/1912/70991
Download here.

SCOR Working Group 168 New 4D BGC Webinar Series

Posted by hbenway 
· Friday, November 15th, 2024 

New webinar series! Find out more 4D-BGC group website: https://4d-bgc.github.io

Past: Webinar #1 on November 26 at 0600 EST/1200 CET

Title: Advancements in Biogeophysical 4D reconstructions: New methods development and exploitation of existing products for scientific investigations

Presenter: Dr. Bruno Buongiorno Nardelli Italian National Research Council

This presentation will address two key topics: the development of physically-informed neural network methods for the joint reconstruction of physical and biological variables in the Mediterranean Sea, and the analysis of existing data-driven 4D reconstructions of POC, combined with advanced dynamical diagnostics, to uncover the interannual variability of organic carbon export in the global ocean. The first part will introduce the approach tested in the European Space Agency’s 4DMED-Sea project, while the second will focus on research conducted within the H2020 AtlantEco project.

Webinar Series Information: The 4D-BGC Working Group seeks to enhance access and utility of Biogeochemical (BGC) Argo observations through four-dimensional (4D) data products. These advanced data products aim to refine our understanding of ocean biogeochemistry, improve biogeochemical models and reanalysis products, and provide valuable insights for policy-making. The goal of this webinar series is to introduce new and in-development BGC data products, review techniques used to develop data products from in situ observations, and to explore ways in which 4D-BGC products are leveraged to answer scientific questions.

Blue Carbon Session at COP29 on Monday Nov. 12

Posted by hbenway 
· Friday, November 8th, 2024 

This event will highlight, in parallel, the quantitative aspects of Blue Carbon (e.g., their roles in NDCs) as well as the more qualitative aspects of Blue Carbon (e.g., cultural ecosystem services). Specifically, this event will address the ways in which blue carbon has been and can be further included in GG inventories and Nationally Determined Contributions (NDCs), through the 2025 NDC revision cycle. This event will highlight some of the tools the United States Government and Pacific partners have created to track and quantify blue carbon sinks, and to identify effective opportunities for conservation and restoration as well as emphasize the
intrinsic and cultural ecosystem services provided by blue carbon in the Pacific.

New Ocean Metaproteomics paper

Posted by mmaheigan 
· Friday, November 8th, 2024 

New Ocean Metaproteomics paper published (web link and pdf link) to help promote proteomics in environmental settings. The study is open access. This paper is a product of OCB’s Intercomparison of Ocean Metaproteomic Analyses.

Capacity Building in Physical Chemistry for Oceanography

Posted by mmaheigan 
· Friday, October 25th, 2024 

Earlier this year, we conducted an online survey and consultation with the broader ocean science community to assess what we perceive as emerging skills gaps in basic physical chemistry training and expertise in several areas of chemical oceanography, especially (but not exclusively) including the ocean carbonate system. In the survey, we asked just for this information:

  1. Expertise, applications, and professional roles
  2. Opinions concerning skills gaps in physical chemistry for different areas of oceanography and needs for capacity building

We received well over 100 responses, with very many insightful observations and answers to our questions. We invite you to read the brief summary report describing the skill gap survey results and associated community feedback on recommended paths forward. Read the report.

Join us for a virtual community discussion at OA Week in November

To follow up on this survey, we are convening an online community discussion on Tuesday 19 November at 1600-1730 GMT/1100-1230 ET as part of the Global Ocean Acidification Observing Network (GOA-ON)’s Ocean Acidification (OA) Week 2024. The purpose of this discussion will be to discuss next steps for a community activity (most likely a workshop), including its focus, content, participants, and outcomes to help address the emerging skills gap identified in the survey. Register to participate in this community discussion HERE. If you would like further information, or you represent an organization that would like to participate in this effort, please get in touch with either Heather Benway (hbenway@whoi.edu) or Simon Clegg (s.clegg@uea.ac.uk).

Submit OCB-relevant sessions for ASLO 2025 Aquatic Sciences Meeting

Posted by hbenway 
· Tuesday, October 15th, 2024 

ASLO 2025 Aquatic Sciences Meeting - Taking the Aquatic Pulse

26-31 March 2025 · Charlotte, North Carolina, USA

https://www.aslo.org/charlotte-2025/

DEADLINE EXTENDED!! Abstracts due Oct. 28!

Share your OCB-relevent special session via this OCB form.

Are you looking to submit an abstract to present? View the session compilation with descriptions, deadlines and more information here: https://tinyurl.com/OCB-related-sessions

Hawaii Ocean Time-series (HOT) can now be accessed using webODV!

Posted by mmaheigan 
· Thursday, October 10th, 2024 

One of the longest running open ocean time-series on our planet, the Hawaii Ocean Time-series (HOT) can now be accessed using webODV at https://hot.webodv.awi.de.

webODV [Mieruch and Schlitzer, 2023]) is the online version of the Ocean Data View (ODV) software. It is developed at the Alfred Wegener Institute, Bremerhaven, Germany with the aim to provide clients with user-friendly interfaces in their web-browser and access datasets that are centrally maintained and administered on a server using the full capacity of ODV.

This platform has recently been adapted to serve physical, biochemical, and ecological data from the HOT program. Dr. Sebastian Mieruch has generated an automated processing chain to aggregate, harmonize, and convert HOT data to the ODV format. Video tutorials for use of webODV to access, plot, and download HOT data can be found at https://hot.webodv.awi.de/docs.

 

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Funding for the Ocean Carbon & Biogeochemistry Project Office is provided by the National Science Foundation (NSF) and the National Aeronautics and Space Administration (NASA). The OCB Project Office is housed at the Woods Hole Oceanographic Institution.