mmaheigan :: Ocean Carbon & Biogeochemistry

Studying marine ecosystems and biogeochemical cycles in the face of environmental change

Author Archive for mmaheigan – Page 18

Blue hole in the South China Sea reveals ancient carbon

Posted by mmaheigan

· Wednesday, July 8th, 2020

Blue holes are unique depositional environments that are formed within carbonate platforms. Due to an enclosed geomorphology that restricts water exchange, blue hole ecosystems are typically characterized by steep biogeochemical gradients and distinctive microbial communities. For the past three decades, studies have described vertical gradients in physical, chemical, and biological parameters that typify blue hole water columns, but their elemental cycles, particularly carbon, remain poorly understood.

Figure 1. Aerial photo of the Yongle Blue Hole in the South China Sea (Credit: P. Yao et al./JGR Biogeosciences)

In July 2016, the Yongle Blue Hole (YBH) was discovered to be the deepest known blue hole on Earth (~300 m). YBH is located in the Xisha Islands of the South China Sea. The unique features and ease of accessibility make YBH an ideal natural laboratory for studying carbon cycling in marine anoxic systems. In a recent study published in JGR Biogeosciences, the authors reported extremely low concentrations of dissolved organic carbon (DOC) (e.g., 22 µM) and very high concentrations of dissolved inorganic carbon (DIC) (e.g., 3,090 µM) in YBH deep waters. Radiocarbon dating revealed that the YBH DOC and DIC were unusually old, yielding ages (6,810 and 8270 years BP, respectively) that are much more typical of open ocean deep water. Based on H₂S and microbial community composition profiles, the authors concluded that sharp redox gradients and a high abundance of sulfur cycling bacteria were likely responsible for much of the DOC consumption in YBH. The unusually low concentrations and old DOC ages in the relatively shallow YBH suggest short-term cycling of recalcitrant DOC in oceanic waters, which has been recognized as a long-term microbial carbon sink in the global ocean. The stoichiometry of DIC and total alkalinity changes suggested that the accumulation of DIC in the deep layer of the YBH was largely derived from both the dissolution of carbonate and OC decomposition through sulfate reduction. However, the role of carbonate dissolution from the walls of the blue hole in affecting the old ages of carbon in this system remain uncertain, yet there appears to no evidence of subterranean freshwater into the bottom waters of the blue hole. In the face of expanding oxygen minimum zones and anthropogenically-induced coastal hypoxia, blue holes such as YBH can provide an accessible natural laboratory in which to study the microbial and biogeochemical features that typify these low-oxygen systems.

Authors:
Peng Yao (Ocean University of China)
Thomas S. Bianchi (University of Florida)
Xuchen Wang (Ocean University of China)
Zuosheng Yang (Ocean University of China)
Zhigang Yu (Ocean University of China)

Unexpected patterns of carbon export in the Southern Ocean

Posted by mmaheigan

· Tuesday, July 7th, 2020

The Southern Ocean is a major player in driving global distributions of heat, carbon dioxide, and nutrients, making it key to ocean chemistry and the earth’s climate system. In the ocean, biological production and export of organic carbon are commonly linked to places with high nutrient availability. A recent paper, published in Global Biogeochemical Cycles, highlighting new observations from robotic profiling floats demonstrates that areas of high carbon export in the Southern Ocean are actually associated with very low concentrations of iron, an important micronutrient for supporting phytoplankton growth. This suggests a decoupling between the production and export of organic carbon in this region.

Figure caption: (A) Meridional pattern of Annual Net Community Production (ANCP) (equivalent to carbon export) (± standard deviation) in the Southern Ocean (blue line with circles and shaded area), carbon export estimates from previous satellite-based analyses (blue dashed line), and silicate to nitrate (Si:NO₃) ratio of the surface water (black continuous line). Grey dotted line shows a Si:NO₃ = 1 mol mol⁻¹, characteristic of nutrient-replete diatoms. (B) Meridional pattern of Southern Ocean nutrient concentrations, including dissolved iron (Fe) concentration (black line), nitrate (red line), and silicate (blue line). (C) Mean 2014–2015 annual zonally averaged air-sea flux of CO₂ computed using neural network interpolation method. STF = Subtropical Front, PF = Antarctic Polar Front, SIF = Seasonal Ice Front.

Using observations of nutrient and oxygen drawdown from a regional network of profiling Biogeochemical-Argo floats deployed as part of the Southern Ocean Carbon and Climate Observations and Modeling project (SOCCOM), the authors calculated estimates of Southern Ocean carbon export. A meridional pattern in biological carbon export emerged, showing peak export near the Antarctic Polar Front (PF) associated with minima in surface iron concentrations and dissolved silicate to nitrate ratios. Previous studies have shown that under iron-limiting conditions, diatoms increase their uptake ratio of silicate with respect to other nutrients (e.g., nitrogen), resulting in silicification. Here, the authors hypothesize that iron limitation promotes silicification in Southern Ocean diatoms, as evidenced by the low silicate to nitrate ratio of surface waters around the Antarctic Polar Front. High diatom silicification increases ballasting of particulate organic carbon and hence overall carbon export in this region. The resulting meridional pattern of organic carbon export is similar to that of the air-sea flux of carbon dioxide in the Southern Ocean, underscoring the importance of the biological carbon pump in controlling the spatial pattern of oceanic carbon uptake in this region.

Authors:
Lionel A. Arteaga (Princeton University)
Markus Pahlow (Helmholtz Centre for Ocean Research Kiel, GEOMAR)
Seth M. Bushinsky (University of Hawaii)
Jorge L. Sarmiento (Princeton University)

Physics vs. biology in Southern Ocean nutrient gradients

Posted by mmaheigan

· Tuesday, June 16th, 2020

In the Southern Ocean, surface water silicate (SiO₄) concentrations decline very quickly relative to nitrate concentrations along a northward gradient toward mode water formation regions on the northern edge (Figure 1a, b). These mode waters play a critical role in driving global nutrient concentrations, setting the biogeochemistry of low- and mid-latitude regions around the globe after they upwell further north. To explain this latitudinal surface gradient, most hypotheses have implicated diatoms, which take up and export silicon as well as nitrogen: (1) Diatoms, including highly-silicified species such as Fragilariopsis kerguelensis, are more abundant in the Southern Ocean than elsewhere; (2) Iron limitation, which is prevalent in the Southern Ocean, elevates the Si:N ratio of diatoms; (3) Mass export of empty diatom frustules pumps silicate but not nitrate to deeper waters.

Figure 1: (a) and (b) nitrate and silicate concentrations in surface waters of the Southern Ocean (GLODAPv2_2019 data). (c) Model results of a standard run (black diamonds), a run without biology (red diamonds) and a run without mixing (blue diamonds).

In a recent paper published in Biogeosciences, the authors use an idealized model to explore the relative roles of biological vs. physical processes in driving the observed latitudinal surface nutrient gradients. Over timescales of a few years, removing the effects of biology (no SiO₄uptake or export) from the model elevates silicate concentrations slightly over the entire latitudinal range, but does not remove the strong latitudinal gradient (Figure 1c). However, if the effects of vertical mixing processes such as upwelling and entrainment are removed from the model by eliminating the observed deep [SiO₄] gradient, the observed surface nutrient gradient is greatly altered (Figure 1c). These model results suggest that, over short timescales, physics is more important than biology in driving the observed surface water gradient in SiO₄:NO₃ ratios and forcing silicate depletion of mode waters leaving the Southern Ocean. These findings add to our understanding of Southern Ocean dynamics and the downstream effects on other oceans.

Authors:
P. Demuynck (University of Southampton)
T. Tyrrell (University of Southampton)
A.C. Naveira Garabato (University of Southampton)
C.M. Moore (University of Southampton)
A.P. Martin (National Oceanography Centre)

Arctic rivers as carbon highways

Posted by mmaheigan

· Tuesday, June 16th, 2020

Rapid environmental changes in the Arctic will potentially alter the atmospheric emissions of heat-trapping greenhouse gases such as methane (CH₄) and carbon dioxide (CO₂). A recent study on the Canadian Arctic published in Geophysical Research Letters reveals that spring meltwater delivery drives episodic outgassing events along the lake-river-bay continuum. This spring runoff period is not well-represented in prior studies, which, due to ease of sampling access, have focused more on summertime low-ice conditions. Study authors established a community-based monitoring program in Cambridge Bay and an adjacent inflowing river system in Nunavut, Canada from 2017-2018. These time-series data revealed that at the onset of the melt season river water contains methane concentrations up to 2000 times higher than observed in the bay from late summer through early spring (Figure 1 panel a). In addition, the authors deployed a novel robotic chemical sensing kayak (the ChemYak) in the Bay for five days in 2018 to densely sample water CH₄and CO₂levels in space and time during the spring thaw (Figure 1 panel b). The ChemYak observations revealed that river water containing elevated levels of both of these greenhouse gases flowed into the bay and outgassed to the atmosphere over a period of 5 days! The authors estimate that river inflow during the short melt season drives >95% of all annual methane emissions from the bay. These results demonstrate the need for seasonally-resolved sampling to accurately quantify greenhouse gas emissions from polar systems.

Figure 1: Panel a) Measurements of methane concentration in Cambridge Bay and an adjacent river showed strong seasonality; elevated concentrations were associated with river inflow at the start of the freshet. Panel b) Observations with the ChemYak robotic surface vehicle in Cambridge Bay revealed that excess methane was rapidly ventilated to the atmosphere following ice melt in the bay.

Authors
Cara Manning (University of British Columbia)
Victoria Preston (Woods Hole Oceanographic Institution and Massachusetts Institute of Technology)
Samantha Jones (University of Calgary)
Anna Michel (Woods Hole Oceanographic Institution)
David Nicholson (Woods Hole Oceanographic Institution)
Patrick Duke (University of Calgary and University of Victoria)
Mohamed Ahmed (University of Calgary)
Kevin Manganini (Woods Hole Oceanographic Institution)
Brent Else (University of Calgary)
Philippe Tortell (University of British Columbia)

A Methane-Charged Carbon Pump in Shallow Marine Sediments

Posted by mmaheigan

· Wednesday, June 3rd, 2020

Ocean margins are often characterized by the transport of methane, a potent greenhouse gas, entering from the subsurface and moving towards the seafloor. However, a significant portion of subsurface methane is consumed within shallow sediments via microbial driven anaerobic oxidation of methane (AOM). AOM converts the methane carbon to dissolved inorganic carbon (DIC) and reduces the amount of sulfate that diffuses down from the seafloor towards a sediment interval known as the sulfate-methane transition zone (SMTZ). The SMTZ is where the upward flux of methane encounters the downward diffusive sulfate flux (Figure 1). While the mechanisms of methane production and consumption have been extensively studied, the fate of the DIC that is produced in methane-charged sediments is not well constrained.

In a recent study published in Frontiers in Marine Science, authors used existing reports of methane and sulfate flux values to the SMTZ and synthesized a carbon flow model to quantify the DIC cycling in diffusive methane flux sites globally. They report an annual average of 8.7 Tmol (1 Tmol = 10¹² moles) of DIC entering the diffusive methane-charged shallow marine sediments due to sulfate reduction coupled with AOM and organic matter degradation, as well as DIC input from depth (Figure 1). Approximately 75% (average of 6.5 Tmol year^–1) of this DIC pool flows upward toward the water column, making it a potential contributor to oceanic CO₂and ocean acidification. Further, an average of 1.7 Tmol year^–1DIC precipitates as methane-derived authigenic carbonates. This synthesis emphasizes the importance of the SMTZ, not only as a methane sink but also an important biogeochemical front for global DIC cycling.

Figure 1: A simplified representation of DIC cycling at diffusive methane charged settings.

The study highlights that regions characterized by diffusive methane fluxes can contribute significantly to the oceanic inorganic carbon pool and sedimentary carbonate accumulation. DIC outflux from the methane-charged sediments is comparable to ~20% global riverine DIC flux to oceans. Methane-derived authigenic carbonate precipitation is comparable to ~15% of carbonate accumulation on continental shelves and in pelagic sediments, respectively. These pathways must be included in coastal and geologic carbon models.

Authors:
Sajjad Akam (Texas A&M University-Corpus Christi)
Richard Coffin (Texas A&M University-Corpus Christi)
Hussain Abdulla (Texas A&M University-Corpus Christi)
Timothy Lyons (University of California, Riverside)

Global change impacts soil carbon storage in blue carbon ecosystems

Posted by mmaheigan

· Wednesday, May 20th, 2020

Vegetated coastal “blue carbon” ecosystems, including sea grasses, mangroves, and salt marshes, provide valuable ecosystem services such as carbon sequestration, storm protection, critical habitat, etc.. Many of these services are supported by the ability of blue carbon ecosystems to accumulate soil organic carbon over thousands of years. Rapidly changing climate and environmental conditions will impact decomposition and thus the global reservoir of organic carbon in coastal soils. A recent Perspective article published in Nature Geoscience focused on the biogeochemical factors affecting decomposition in coastal soils, such as mineral protection, redox zonation, water content and movement, and plant-microbe interactions. The authors explored the spatial and temporal scales of these decomposition mechanisms and developed a conceptual framework to characterize how they may respond to environmental disturbances such as land-use change, nutrient loading, warming, and sea-level rise.

Figure caption: Temperate salt marshes (MA, USA). Healthy salt marshes have lush stands of grasses (top). Storms can expose peat deposits that have been buried for thousands of years (bottom). The fate of this soil carbon is unknown, but some fraction will be respired by microbes and returned to the atmosphere as CO₂.

Improved estimates of soil organic carbon in blue carbon systems will require better characterization of these processes from sustained data sets. Furthermore, incorporation of these decomposition mechanisms into ecosystem evolution models will improve our capacity to quantify and predict changes in these soil carbon reservoirs, which could facilitate their inclusion in global budgets and management tools.

Temperate salt marshes (MA, USA). Healthy salt marshes have lush stands of grasses (left/top). Storms can expose peat deposits that have been buried for thousands of years (right/bottom). The fate of this soil carbon is unknown, but some fraction will be respired by microbes and returned to the atmosphere as CO₂.

Authors:
Amanda C Spivak (University of Georgia)
Jon Sanderman (Woods Hole Research Center)
Jennifer Bowen (Northeastern University)
Elizabeth A. Canuel (Virginia Institute of Marine Science)
Charles S Hopkinson (University of Georgia)

Light matters for biological pump assessments

Posted by mmaheigan

· Thursday, May 7th, 2020

Organic carbon produced during photosynthesis in the sunlit euphotic zone is transported to the deep ocean via the ocean’s biological carbon pump (BCP). Even small changes in the BCP efficiency changes the carbon dioxide gradient across the ocean‐atmosphere interface, thus influencing global climate. A recent study in PNAS demonstrate that prior studies that estimate BCP efficiencies at a fixed depth fail because they do not consider the varying depth of light penetration, which ultimately controls production of sinking organic carbon and varies by location and season. Subsequently, the fixed depth approach introduces regional biases and underestimates global estimates of BCP efficiency by two-fold (Figure 1). These new findings make the case for using euphotic zone‐based metrics rather than applying a fixed depth to compare BCP efficiencies between sites. Improved estimates of BCP efficiency will lead to a better understanding of the mechanisms that control ocean carbon fluxes and its feedbacks on climate.

Figure 1: Carbon loss from the surface ocean shows more variability and is twice as high if measured at the depth where sunlight penetrates (left) vs. 150 meters (about 500 feet; right) where it is commonly measured. One Pg is 10¹⁵ grams with close to 6 Pg of carbon being transported to depth per year in left panel. In comparison, about 10 Pg C/yr is released to the atmosphere as a result of human activity.

Authors:
Ken Buesseler (WHOI)
Philip Boyd (IMAS Univ. Tasmania)
Erin Black (Dalhousie University)
David Siegel (University of California, Santa Barbara)

Also see: Tiny plankton drive processes in the ocean that capture twice as much carbon as scientists thought on The Conversation.

Featured on the cover of the PNAS May 5, 2020 issue:

Autonomous platforms yield new insights on North Atlantic bloom phenology

Posted by mmaheigan

· Wednesday, April 22nd, 2020

Phytoplankton produces organic carbon, which serves as a major energy source in marine food webs and plays an important role in the global carbon cycle. Studies of phytoplankton seasonal timing (phenology) have been a major focus in oceanography, especially in the subpolar North Atlantic region, where massive increases in phytoplankton biomass (blooms) occur during the winter-spring transition.

Figure 1. Panel a: Each line represents the trajectory of a profiling Argo float deployed during the North Atlantic Aerosols and Marine Ecosystems Study (NAAMES) expeditions (12 total); the initial float deployment location is denoted by a filled circle. The bar chart (inset right bottom) indicates float deployment durations. Panel b: Seasonal climatologies of C_phyto (green), µ (blue), l (red), and r (grey) from Argo floats for all 4 regions (D1-D4 as indicated on map in Panel a).

Many hypotheses based on data from shipboard discrete sampling or satellite remote sensing have been proposed to explain drivers of phytoplankton bloom formation and dynamics. However, discrete shipboard sampling limits both spatial and temporal coverage, and satellite approaches cannot provide direct information at depth. To address this gap in spatiotemporal coverage, a recent study in Frontiers in Marine Science, applied bio-optical measurements from 12 Argo profiling floats to study the year-round phytoplankton phenology in a north-south section of the western North Atlantic Ocean (40° N to 60° N). The authors calculated phytoplankton division rate (µ), loss rate (l), and carbon accumulation rate (r) using the Argo-based Chlorophyll-a (Chl) and phytoplankton carbon (C_phyto) estimates. Latitudinally varying phytoplankton dynamics were observed, with a higher (and later) C_phyto peak in the north, and stronger μ–r decoupling and increased proportion of winter to total annual production in the south (Figure 1). Seasonal phenology patterns arise from interactions between “bottom-up” (e.g., resources for growth) and “top-down” (e.g., grazing, mortality) factors that involve both biological and physical drivers. The Argo float data are consistent with the disturbance recovery hypothesis (DRH) over a full annual cycle. Float-based mixed layer phytoplankton phenology observations were comparable to satellite remote sensing observations. In a data-model comparison, outputs from an eddy-resolving ocean simulation only reproduced some of the observed phytoplankton phenology, indicating possible biases in the simulated physical forcing, turbulent dynamics, and biophysical interactions.

In addition to seasonal patterns in the mixed layer, float-based measurements provide information on the vertical distribution of physical and biogeochemical quantities and therefore are complementary to the satellite measurements. This powerful combination of observing assets enhances spatiotemporal coverage, thus enabling us to better observe, compare, model, and predict seasonal phytoplankton dynamics in the subpolar North Atlantic.

Authors:
Bo Yang (University of Virginia)
Emmanuel S. Boss (University of Maine)
Nils Haëntjens (University of Maine)
Matthew C. Long (National Center for Atmospheric Research)
Michael J. Behrenfeld (Oregon State University)
Rachel Eveleth (Oberlin College)
Scott C. Doney (University of Virginia)

An Important Biogeochemical Link between Organic and Inorganic Carbon Cycling: Contributions of Organic Alkalinity

Posted by mmaheigan

· Wednesday, April 8th, 2020

As a part of dissolved organic carbon (DOC), organic acid charge groups can contribute significantly to total alkalinity (TA) in natural waters. Such a contribution is termed as organic alkalinity (OrgAlk). Beyond being part of TA, OrgAlk represents an important biogeochemical linkage between organic and inorganic carbon cycling. In other words, the biogeochemical cycling of organic acid charge groups – i.e. their sources, sinks, and biogeochemical behaviors – directly impacts pH and carbonate speciation, which may ultimately influence air-water CO₂ exchange and inorganic carbon fluxes. However, the effects of OrgAlk is often ignored or treated as a calculation uncertainty in many aquatic CO₂ studies. How we treat and study OrgAlk may need a new paradigm under biogeochemical cycles.

Based on direct titration data of OrgAlk, the authors of a recent study conducted a comprehensive assessment of OrgAlk variability, sources, and characteristics in a sub-estuary of Waquoit Bay (Massachusetts). The sub-estuary is influenced by a salt marsh, groundwater input, and offshore water. Both the salt marsh and groundwater OrgAlk contributed up to 4.3% of the TA across all sampled seasons. Estuarine OrgAlk:DOC ratios varied across space and time, which suggests that their abundances are controlled by different biogeochemical processes. In addition, the study demonstrates the insufficiency of using a fixed proportion of DOC to account for OrgAlk, as well as the challenge of using measured pH, TA, and dissolved inorganic carbon (DIC) to estimate OrgAlk. The effects of OrgAlk in these waters are equivalent to a pH change of ~ 0.03 – 0.26, or a pCO₂ change of ~30–1600 matm. If extrapolating OrgAlk results to other coastal systems ranging from estuaries to continental shelves, OrgAlk would exert a strong control on both carbonate speciation and, ultimately, air-sea CO₂ fluxes. This study provides a new conceptual framework for cycling of OrgAlk species and associated links between DOC and DIC pools in coastal systems (Figure 1).

Figure caption: A conceptual model of organic alkalinity cycling in coastal systems. BioP and ChemP represent in-situ biological production and chemical production of organic acid charge groups, respectively. Alk denotes total alkalinity. Arrows with dashed lines indicate processes that were not studied in the present study. The values in the boxes of pH, pCO₂, and buffer capacity represent the magnitude of OrgAlk effects on pH, pCO₂, and buffer capacity in the range of OrgAlk% in TA observed in this study (0.9 – 4.3%).

Authors
Shuzhen Song (East China Normal University)
Zhaohui Aleck Wang (Woods Hole Oceanographic Institution)
Meagan Eagle Gonneea (U. S. Geological Survey)
Kevin D. Kroeger (U. S. Geological Survey)

Little big exporters

Posted by mmaheigan

· Wednesday, April 8th, 2020

In the Southern Ocean, coccolithophores are thought to account for a major fraction of marine carbonate production and export to the deep sea. Despite their importance in the ocean carbon cycle, we lack fundamental information about Southern Ocean coccolithophore abundance, species composition, and contribution to carbonate export.

Figure caption: Heliscosphaera carteri (left), Coccolithus pelagicus (right) and Emiliania huxleyi (bottom right, partially behind C. pelagicus) coccospheres retrieved from the subantarctic waters south of Tasmania. Image Ruth Eriksen, courtesy AAD EMU.

A recent study in Biogeosciences has generated annual observations of coccolithophore species composition and contribution to calcium carbonate fluxes at two sites that are representative of a large portion of the Subantarctic zone. Coccolithophores account for roughly half of the annual calcium carbonate exported to the deep sea. Notably, it is not the most abundant species (Emiliania huxleyi), but rather the less abundant and larger species (e.g. Calcidiscus leptoporus, Helicosphaera carteri and Coccolithus pelagicus) that make the greatest contribution to carbonate export to the deep sea. Since these larger species exhibit substantially different ecological traits from the opportunistic E. huxleyi, predictions of future response of Southern Ocean coccolithophore communities should not be based on the physiological results from experiments with E. huxleyi. Rather, new physiological response experiments of those less abundant, larger coccolithophore species are urgently needed to constrain responses of these important carbonate exporters to environmental change in the Southern Ocean. This study underscores the importance of phytoplankton ecological traits on the regulation of the marine carbon cycle and emphasizes the need for more species-specific studies to improve predictions of marine ecosystem response to ongoing climate change.

Authors
Andrés S. Rigual Hernández (Universidad de Salamanca)
Thomas W. Trull (CSIRO and ACE CRC)
Scott D. Nodder (NIWA)
José A. Flores (Universidad de Salamanca)
Helen Bostock (University of Queensland,)
Fátima Abrantes (Portuguese Institute for Sea and Atmosphere and CCMAR)
Ruth S. Eriksen (CSIRO and IMAS)
Francisco J. Sierro (Universidad de Salamanca)
Diana M. Davies (CSIRO and ACE CRC)
Anne-Marie Ballegeer (Universidad de Salamanca)
Miguel A. Fuertes (Universidad de Salamanca)
Lisa C. Northcote (NIWA)

Funding for the Ocean Carbon & Biogeochemistry Project Office is provided by the National Science Foundation (NSF) and the National Aeronautics and Space Administration (NASA). The OCB Project Office is housed at the Woods Hole Oceanographic Institution.

Author Archive for mmaheigan – Page 18

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